Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0043 |
Symbol | |
ID | 6165020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 29809 |
End bp | 30756 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641667208 |
Product | hypothetical protein |
Protein accession | YP_001793447 |
Protein GI | 171184528 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0208895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTTG TGCCCTCTGC GGAGGAGGTG AGGAGGAGGA TCGTGGAACA CGGGCTCTCT ATCCGCGACA AGGTGGTTGA AACTCTTCCA CACAGCTACG GCCTTGTCGT AGAACAGGTA AAGTCGATAT CGCGTGTCTA CAAAGGCGAC TTCGAGACTT ATCTGTCGAG TCTGTCAAAC GTGAAGGGGC TTGATCTGTT GGTTATATAC GCGGCGCTCG TGGCCGCGCT GTATAGCCGT AGGCCTATCG GCGAAGAGGA GCTGAGGAAG CTCGCCGGCG CTTTTGAGGC AAACGTGTAT GACGTGGTCT CAGCCTCGAA GCTGCGTAGA GCTCTTGAGG CTGTTGGGGT CGAGAGGGAG GTGGCAGACG AGACCATCTC CAACCTCTTG AGGATGTTGA ACGTGGTGGG CGTGAGGTAT AAATCGCCGT ATCTCTGGGT GGCTAAACAG AGGAGGTTGC CCAAGTTCGA AAAGGAGGTT AGAGACTTCA TCTTCAGGGG CAGGGGAGGG GGGCGCGTGG GGAGGGGCGT AAAGCTCTTC CTAAGGCTCT TCATACACGA GACCAACATC CCGCTGGCGC TCAGGATCGC CTACACGCCA GAGTATAGAA AATACATACT ACATGGGGAT ATGTACACCG CGTTGGTCAC GTTGAGATCC GGCGCCTTCG AAGACGTGAC CACCCTCACG GCGGAGCGGA TAAGGGCTAG GGTGGCCAAG AGGATACTGT GCGAGGCCAG AGAGGGGGGT CCCCGGTGCC GCGACGTGGT TTTTAGGCTT GAGAGCGTCC GCGGCCTTGT GAGATACGTG GGCAAGATAA GCGGCGATCC TGTGTTGTAC GAGAGGGGGG CCTACGACAT AGGGGCTAGG TACTGCCGTG ATCTAAAATG CGATTCGTGC CCAATAAGGG ACGTGTGTAG ACGCTACACC TTCATTAAGC TGAAGTAG
|
Protein sequence | MALVPSAEEV RRRIVEHGLS IRDKVVETLP HSYGLVVEQV KSISRVYKGD FETYLSSLSN VKGLDLLVIY AALVAALYSR RPIGEEELRK LAGAFEANVY DVVSASKLRR ALEAVGVERE VADETISNLL RMLNVVGVRY KSPYLWVAKQ RRLPKFEKEV RDFIFRGRGG GRVGRGVKLF LRLFIHETNI PLALRIAYTP EYRKYILHGD MYTALVTLRS GAFEDVTTLT AERIRARVAK RILCEAREGG PRCRDVVFRL ESVRGLVRYV GKISGDPVLY ERGAYDIGAR YCRDLKCDSC PIRDVCRRYT FIKLK
|
| |