| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0033 |
|---|
| Symbol | |
|---|
| ID | 6164872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 24361 |
|---|
| End bp | 25572 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641667198 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_001793437 |
|---|
| Protein GI | 171184518 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00542605 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGGAATA GGGCCCTTCT CTCATACGTA GGCCCCAAGA CGCCCAACCT AGCTTACAAG
CTTGAGGAGT TTGTATCCCT CGCCGAGGTG GCCGGGTTCG AGGTGGTGGA CCTAATTACC
CAGTTCGGCA GAGCCGACAC CAGGTTTTAC CTCGGCCCGG GCAAGGCCGA GGCGGTGGCG
GCTAAGGACT TCGACGTCTT TATCGCATAC CACAGCCTCA CCCCTCTACA GGTGTTCAAC
CTGGAGAGGC TGTTTAAACG TAGGGCGCTG GATAGGGTTC TGGTCATACT CATGATCTTT
GAAAAAAGGG CTGGTAGCAT AGAGTCGAAG CTCCAGATCG AGCTAGCCCG CCTTAGATAC
GAACTGCCTA AGGTCAAGGA GTACCTGAGG CGAGCTAAGA TGGGCGAGCA GCTCGGCTTC
ATGGGCGCCG GCGAGTACAT AGTCGACGCC TACTACCGCC ACATGGTGAA GAGGATTTCG
ACGATTAGGA GAAAGCTGGA GGAGGTGCGC AGGAGTAGAG TCATGCATAT AGCTAAGCGG
AAGGAGGCGG GGGTTCCCGA GGTGGTGATC ACCGGCTACA CCAGCGCCGG CAAGACGACG
CTCTTCAATA GGCTGGTGGG CGAGGACAAA CTGGTGGACG GCAAGCCCTT TGCCACGTTG
GAGACCTACA GCCGATCTCT GGACCTCTGG GGCAAGAGAG TCGTTGTGAC AGACACCATA
GGCTTCATAG ATGACCTCCC GCCGCTCCTC GTCGAGTCCT TCCACTCGAC GCTCCAGGAG
ATCATAGACG CCGACGTCAT TCTCCTAGTC GTAGACGGCT CGGAGCCGCG GGAGGAGATC
TCCCGCAAGA TAGAGACCTC CGTGGCAACC CTGGGCGAGG TGGGCATAAG CCGAGACAGG
GTGATACCCG TTGTCAACAA GGTGGATAAA ATCGGGGTGG CGGAGGTGAA GAATCTGCGG
GGCATAGTGG GTAGGTACTT CAGCTGGTTC ATCCCGGTGT CCGCCCTTAC CGGCTTTGGG
ATCGAGGCGC TCAAAGCCGT GTTGTTTTTC AAAACGCCGG GCTACCAGAT ATCCAGAACC
GCCAGCGCAG AGGGGGCAAG AGGCCTACGC GTCGGAGATG TGACGTTCGT AGCCACGCGC
CCAGCTCCCC TTTGCGGCTC CCGGTCTCCC CGGGGGAGCT CGGGACCCGC CCGCGGAGAT
GATGCGAGAT AG
|
|---|
| Protein sequence | MRNRALLSYV GPKTPNLAYK LEEFVSLAEV AGFEVVDLIT QFGRADTRFY LGPGKAEAVA
AKDFDVFIAY HSLTPLQVFN LERLFKRRAL DRVLVILMIF EKRAGSIESK LQIELARLRY
ELPKVKEYLR RAKMGEQLGF MGAGEYIVDA YYRHMVKRIS TIRRKLEEVR RSRVMHIAKR
KEAGVPEVVI TGYTSAGKTT LFNRLVGEDK LVDGKPFATL ETYSRSLDLW GKRVVVTDTI
GFIDDLPPLL VESFHSTLQE IIDADVILLV VDGSEPREEI SRKIETSVAT LGEVGISRDR
VIPVVNKVDK IGVAEVKNLR GIVGRYFSWF IPVSALTGFG IEALKAVLFF KTPGYQISRT
ASAEGARGLR VGDVTFVATR PAPLCGSRSP RGSSGPARGD DAR
|
|---|
| |