| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0030 |
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| Symbol | |
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| ID | 6166119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 21573 |
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| End bp | 23057 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641667195 |
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| Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
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| Protein accession | YP_001793434 |
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| Protein GI | 171184515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00267485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTCCTTTG AAATAGTTGC TAAGGACTTG GCCGGGAGGG TGGGGCTACT CCACACGAAG
AGCGGGGTGG TGGAGACGCC GGCTCTCTTC CCGGTTGTAG ACCCTAGGAA GCAGGAGGTG
CCTCTGGAGG CGGTCCAGCG GTATTTTGGA CAGGTGATCA CGAACTCGTA CTTCATATAT
AGGCTGACCG GGGGGAGGGC CGTTGATGTG AAAAAGATGC TGGGGTGGGG CGGCGTCGTT
ATGACGGACT CGGGCGCCTA CCAGATCTTG AGGTACGGCA CCGTGGAGGT TGACCCAGAT
GAAATTCTGC GCTTCCAACA GAAGATCGGT AGCGACATAG GCGTAATTCT AGACCTCCCC
TTCGACTACG AGGAGCCGTA CGGAAGCGCG TTGCTCAAGG TGGAGGAAAC CATCAGGCGG
GCGAAGAGGG CCGCCGCCTA TCTGAAGGAG ATGGACATGT TGGTGGTGGC GCCTATCCAG
GGAGCTCTCT ACGCCGACCT CCTCGCCAGA TCCGCCAGAG AGCTTTCGAG ACTGGGCTTC
CACATATTCG CCATAGGGAG CCCCACCACC TTGCTGGAGG AGTATAGGTT TGACCTCATC
CTCAGGGTGG TTCTAGAGGT GAAGGCCAAC ATAGCTAGGG AGGCGCCTAT ACACCTATTT
GGGGCAGGGC ACCCGCTGGT GTTGCCCTTC GCCGTGGCGC TGGGGGTGGA CCTCTTCGAC
AGCGCTTCCT ATATACTCTA TGCGCGAGAC GACAGAATCA TACTTAGGGA CCGCACTCTC
CGTCTAGACG ACGTTAAGAC AGACTACCTC CCATGTAGCA CTAAGCTCTG CTACACGCCT
GTGAAAGAGC TAAGGGAGAT GCCCAAGCAG GAGCGCACGC TTCTAATAGC GGAGCACAAC
CTGGCCGTCC TAAGGGAGGA GCTCCTGGAG ATAAGACAGA GAATTCACGA AGGCACCCTC
TGGGAGTACC TGGAAATCAA GGCGAGGGCG CATCCGACGC TGTATAGGTT CCTCAAGTCT
ATCGACCGCC GTCTACTGGA GGAGTACGAC CCGGAGACGC ATCCAGATCC ACACGGCCTC
TTCTTCTACT CAGACACCGC ACCGCGGAGG CCGGAGCCGG CGAGACACAG GGAGAGGCTA
AACAACGTAG AGCCCCTCTC TAGGAGGGCC GTCGTTATAA AGGTGGAGGA GAAGCCGTAC
AACCGCAACT GGCAGTACCT CTACCTGAAG AAGACGCTGG GGGACCGCGC CCACATACTC
TTCTACGACC CCATCTTCGG GATTATTCCA GAGGAGATCG CTGAGGTGTA CCCGCTGTCT
CAAAACGAGT CAGAGGGCGA AGACGAGGAG GCTAGGGCAC ACGCCTATGA GTGGCTGAGG
CGCTACGACC TGGTGGTGCT GTACAACGTC GATATCCCGC TGATGGGGAA AAAGGTCGTT
AAGGCCAGAT CTCTGGAGGA GGTAGCGCTA TATATACAGC CTTGA
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| Protein sequence | MSFEIVAKDL AGRVGLLHTK SGVVETPALF PVVDPRKQEV PLEAVQRYFG QVITNSYFIY
RLTGGRAVDV KKMLGWGGVV MTDSGAYQIL RYGTVEVDPD EILRFQQKIG SDIGVILDLP
FDYEEPYGSA LLKVEETIRR AKRAAAYLKE MDMLVVAPIQ GALYADLLAR SARELSRLGF
HIFAIGSPTT LLEEYRFDLI LRVVLEVKAN IAREAPIHLF GAGHPLVLPF AVALGVDLFD
SASYILYARD DRIILRDRTL RLDDVKTDYL PCSTKLCYTP VKELREMPKQ ERTLLIAEHN
LAVLREELLE IRQRIHEGTL WEYLEIKARA HPTLYRFLKS IDRRLLEEYD PETHPDPHGL
FFYSDTAPRR PEPARHRERL NNVEPLSRRA VVIKVEEKPY NRNWQYLYLK KTLGDRAHIL
FYDPIFGIIP EEIAEVYPLS QNESEGEDEE ARAHAYEWLR RYDLVVLYNV DIPLMGKKVV
KARSLEEVAL YIQP
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