Gene Tneu_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0017 
Symbol 
ID6164900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp9625 
End bp10404 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID641667182 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_001793421 
Protein GI171184502 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.437741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGAGA CCTGGAGACT CGTGAGGAGG GTTGTGGAGG ACGGCGATGT GGTTTTGGAG 
GTCCTAGACG CCAGAGACCC CCTGGCCACA AGGAGCGAGG AGGTGGAGGA GCTTGCGGAT
AGGCTCGGCA AGAGGCTTCT CGTCGTGTTG AACAAGGCCG ACTTGGTGGA GAGGGGGCTT
CTCGAGGAGT GGAGGAGGTA TTTCGAGGGT CTGGGGAGGG CTGTGGTGTA CATCAGCGCC
AAGTATAGGC TGGGCACCCG GAGGCTGATC ACCGCCATCA GGTACCTGGC CCCTAGGATC
CCCGCCACCG TGGTGGTGGT GGGCTACCCC AACGTCGGCA AGTCCACAAT TATCAACTAC
CTCAAGGGGC GGCATGTGGC GCCCACCAGC CCGAAGCCCG GCTGGACTAG GGGCGAGCAA
CTCGTGAGGG CTAAGAGCTG GCTCTTGGTG CTGGACACGC CGGGCATCGT GAGGGCTACA
ACCACGGGGG ACCTAGCGCT TGACGTAGTT AGGGGGTTGG TGGATCCCGG CACCGTGGAC
GACCCAGTGC CGTACGCATA CGCTCTGCTC AAGCGCGTGT TGAGCTACAA CCCGGACGCC
CTTAGGGAGG CCTACGGCGT TAACTGCGGC TTGGAGGAGG CGCTGGAGGA GATCGGGCGA
GCTAAGAAGA GGCTTCTGAG GGGGGGTAGG GTGAACGTGG AGGAGGCGGC GCGTATCGTG
TTGAGAGACT GGGTGCTCGG GAGGCTGAGG TACGCGGCGC CTCCGCCTAA ACAGATATAA
 
Protein sequence
MKETWRLVRR VVEDGDVVLE VLDARDPLAT RSEEVEELAD RLGKRLLVVL NKADLVERGL 
LEEWRRYFEG LGRAVVYISA KYRLGTRRLI TAIRYLAPRI PATVVVVGYP NVGKSTIINY
LKGRHVAPTS PKPGWTRGEQ LVRAKSWLLV LDTPGIVRAT TTGDLALDVV RGLVDPGTVD
DPVPYAYALL KRVLSYNPDA LREAYGVNCG LEEALEEIGR AKKRLLRGGR VNVEEAARIV
LRDWVLGRLR YAAPPPKQI