Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0016 |
Symbol | |
ID | 6164835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 8980 |
End bp | 9588 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641667181 |
Product | V-type ATPase, D subunit |
Protein accession | YP_001793420 |
Protein GI | 171184501 |
COG category | [C] Energy production and conversion |
COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.304681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGGCCAAG TGGCGTTTAG ACCACCCCCA TCCAGGCTGG AGCTGATAAG GCTTAGGCGG CAGCTGGTGC TTTTCCAGAG AATGAAAAAA ACCCTGGAGG ACGCGCGCAA CTCCACAATA CAGAGGATCA GAGCCCTCAT ACCCGACCTA GAAAGGCTGA GGCGGGAGAT AGCCGACGGG TTCGTCGAGG TAGCAACCAA CTTCAAAATC GCGATAGCCA AGACCGGCAT CGACAGGGTA GAAAACATAG CGGAGCTCAC CCCCAAAACC GTAAAGGTAG AGCTGGTAAA CAGGGGGACG CACACCGGCC TCGAGGTCAG CAACTACGTG ACCTACCCCA CCTACAGCCT CGCCACGGAG GCCGCGGAGC TCGACGTAGC CCTCGTGAAG ATGAGAGAGC TCCTCAAGAA GCTTGTGGAG TTCGCAGAAA AGGAGACGCT CTTCTACACC CTCCTGAGGA GGGTTAGGGA GTACCAGAGG ATGATAAACA GCATAGACTA CGTGATAATC CCACGCATAA GAGAAAACAT GCAGTACATA AGGCTGGCGC TTGAGGAAGG CGAAAGAGAG GAGTTCATAA GGAGAAAGAT AATAACATCA CGTATATAA
|
Protein sequence | MGQVAFRPPP SRLELIRLRR QLVLFQRMKK TLEDARNSTI QRIRALIPDL ERLRREIADG FVEVATNFKI AIAKTGIDRV ENIAELTPKT VKVELVNRGT HTGLEVSNYV TYPTYSLATE AAELDVALVK MRELLKKLVE FAEKETLFYT LLRRVREYQR MINSIDYVII PRIRENMQYI RLALEEGERE EFIRRKIITS RI
|
| |