| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0001 |
|---|
| Symbol | cdc6 |
|---|
| ID | 6164376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 75 |
|---|
| End bp | 1244 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641667166 |
|---|
| Product | cell division control protein 6 |
|---|
| Protein accession | YP_001793405 |
|---|
| Protein GI | 171184486 |
|---|
| COG category | [L] Replication, recombination and repair
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTA TCGCCAACGA AGCCGTATTT TCGCCCAGCT ATGTCCCCGA CAGACTCCCC
CACAGGGAGC AACAGCTACA GCAGCTCGAC ACGTTGTTTG GCGGATGGCT GAGGAGCCCC
GGCAACCACT ACCCAAGAGC TACCCTCCTC GGCAGGCCGG GCACCGGCAA AACAGTCACC
TTGCGCAAGC TGTGGGAGCT CCGCAGAGGC GAGGCGGCGG CGCGGTTTGT CTACATCAAC
GGCTTTCTAT TCCGCAACTT CACAACCATC GTAGGCGAGA TAGCCAAGTC GCTGAATATA
CCCTTCCCGA GGCGGGGCCT CAGCCGCGAC GAGTTCCTGG CCCTCCTCGT TGAACACCTC
CGCGAGAGGG ACATCTACGT TTTTCTAGTT CTAGACGACG CCTTCAACTT CGCGCCAGAC
ATACTCTCGA CTTTTATCAG ACTTGGGCAA GAGACCGACA AGCTCGGGTC TTTTCGAATA
GCCCTCGCCG CCGTGGGCCA CAGCGATACG ATCCTCAACA ACCTGGACCC GTCCACCAGA
GGCATCATGG GGAAATACGT CGTGCGTTTT ACGCCATATA CAAAAGACCA GATCTTCGAC
ATATTGCTCG AGAGGGCGCG GGCGGGGCTC GCAGACGGGT CCTACAGCGA GGAGATACTC
CAGATGATCG CGGATATAAC CGGGGCGCAG AGTCCGCTTG ATACAAACAG GGGAGACGCC
CGGCTCGCGA TAGACATTTT ATACAGAGCA GCCCACCTTG CTCAACAAAG CGGCAGGAGA
CAGATAACGC CAGAGGACGT CAGAAGATCA TCCAAGGAGG TCCTATTCGG CGTCTCGGAG
GAGGTGCTCG TGGGCCTCCC CCTCCACGAG AAGCTCTTCC TACTGGCGGT CGTCAGAACG
CTTAAGACCA CCCGCGCCCC ATACGTCTCC TTCGGCGACG CCGAGGAGGT GTACAAGATG
ATATGTGAAG AATATGGAGA GAAGCCCAGG GTACACAGCC AGCTGTGGAC CTACCTAGGG
GATCTACGGG AGAGGGGCAT AATCGAGACG CGGCAGAACA AAAAAGGCGA GGGCATGAGG
GGCCGCACGA CGCTAATATC CATAGGGACG GAGCCTCTGG ACACGCTAGA GGCCGTCCTC
ACCAAGATGA TAAACGAGGA GCTTAAATGA
|
|---|
| Protein sequence | MGIIANEAVF SPSYVPDRLP HREQQLQQLD TLFGGWLRSP GNHYPRATLL GRPGTGKTVT
LRKLWELRRG EAAARFVYIN GFLFRNFTTI VGEIAKSLNI PFPRRGLSRD EFLALLVEHL
RERDIYVFLV LDDAFNFAPD ILSTFIRLGQ ETDKLGSFRI ALAAVGHSDT ILNNLDPSTR
GIMGKYVVRF TPYTKDQIFD ILLERARAGL ADGSYSEEIL QMIADITGAQ SPLDTNRGDA
RLAIDILYRA AHLAQQSGRR QITPEDVRRS SKEVLFGVSE EVLVGLPLHE KLFLLAVVRT
LKTTRAPYVS FGDAEEVYKM ICEEYGEKPR VHSQLWTYLG DLRERGIIET RQNKKGEGMR
GRTTLISIGT EPLDTLEAVL TKMINEELK
|
|---|
| |