Gene Lcho_4375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4375 
Symbol 
ID6161028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4892957 
End bp4893532 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content72% 
IMG OID641667152 
ProductMOSC domain-containing protein 
Protein accessionYP_001793391 
Protein GI171061042 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.480561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGC TCAGCCTCAA CCTCGGCACC GTCCGCCCCC TGATGATCGA CGGGCGACGC 
ATCATGACCG CGATCGGCAA GGCGCCGGTG GCCGGGCCGG TGGCGGTCGG CCGGCTGGGG
CTGGCCGGCG ACGAGCAGGC CGACCCGAGC GTGCACGGCG GGCTCGACAA GGCGATCTAC
GCCTGGCCGG GCGAGCACTA CGCCTGGTGG CAGGCGCAGC GGCGCGAACG CGGTACGAGC
CTATTCGACG AGACCCTGCC GGCCGGCTTC GCGGGCGAGA ACCTCACGCT GCAGGGGCTG
GACGAACAGC AGGTGTGGGT GGGCGACGAG CTGCACTTTC CCGACTGCGT GCTGCGGGTC
ACGCAGCCGC GCGAGCCCTG CTTCAAGTTC AACGCCGTGA TGGGCTACGC GCAGGCCGCC
CGCGACATGG TCACCTCCGG GCGCAGCGGC TGGTATCTGG CGGTGCAGCA GCCCGGCACG
CTCGAAGCCG GCCAGCCCTT CGAGCTGCGC GCGGGTTCAC GCAGCGTGGG CATCGCGCAG
GCGCTGGCCG GCAAACGCCA CAAGCACCTG CGCTGA
 
Protein sequence
MQLLSLNLGT VRPLMIDGRR IMTAIGKAPV AGPVAVGRLG LAGDEQADPS VHGGLDKAIY 
AWPGEHYAWW QAQRRERGTS LFDETLPAGF AGENLTLQGL DEQQVWVGDE LHFPDCVLRV
TQPREPCFKF NAVMGYAQAA RDMVTSGRSG WYLAVQQPGT LEAGQPFELR AGSRSVGIAQ
ALAGKRHKHL R