| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4371 |
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| Symbol | |
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| ID | 6161181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4889146 |
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| End bp | 4890915 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641667148 |
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| Product | histidine kinase |
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| Protein accession | YP_001793387 |
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| Protein GI | 171061038 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.948741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAC CCTTGCACGA CCCGCGCGCC GTCACCGGAA CCACCCCCGA CAGCGCGACC
GACGCCCCGC CCGCCTCGCG CCCTGCCCGC CTCGTCAGCC GCTGGGCGCT GCGCTTCATG
CTGGCGATGC TGGCGATCGC CTGGGCCTCG GTGCTGGTCG TGATCGGCCT CGAATACCGC
GAGTCGATGG CCGCGCAGGC GCGCCACAAC ACCAACCTCG CGCGCGCCTT CGAGGAGCAG
ACCGTGCGCG TGGTGGCGGC CGTCGACCAG GCCACCATCC GCATGCGCGA CGCGGTGCGC
AGCGGCGCGC ACACGCTGGC CGACCTGGCG CAGTTCGCCA ACGAGACCGG CATGGCGCCG
ACCATCCTGG TGCAGCTCTC GCTGGTCGGG CCGGACGGCC GCTTCAGCGG CAGCAACCTC
GACCCCGACG GCAGCAAGAC CGGCCACGTC GACCTGTCCA CGCGCGAGCA CATCCGCGTC
CACCTGAGCC CCGACGGCGC CGCCGGGCAG CATGCCGACG GCCTGTTCAT CGGCAAGCCG
GTGCTCGGCA AGGTCTCCGG GCGCTGGACG ATCCAGCTGT CGCGCCGCAT CGACGGGCCG
GACGGCCGGG TGCTGGGCGT GGTGGTGGCC TCGCTCGACC CGAGCTACTT CGAGAACGTC
TACCGCAGCG TCGAGCTCGG CCGCCAGGGT GGCGTGACGC TGGTCGGCAC CGACCTGGCG
ATCCGCGCCC GCGTGATGGG CGACTCCAGC CTCGGCATGG GCGCCAACAT CGGTGCCGCC
AGCCCGCTGG TGAGCGGCGG CTGGCAGCGT TCGGGCGACT ACGTCAGCGC CAGCACGGTC
GACGGCGTCG AGCGCCTGGT CGGCTACCAC CGCATCGACG ACTACCCGCT GTACGTCCTG
GTGTCGTCGG CCACCGCCGA ATCGCTGGCC GGCTGGCGGG CGATGCGCAA CACCGTGCTG
CTGCTGACCG CGCTGCTCAG CGCGGCCGTG ATCGCCGCGG CCTGGATCTT CCTGAGCAAC
GTGCGGCGCC TGGAAGCCAG CAACGTCGCG CTGATCGCCA GCGAGGCGCG GGCGCAGTCG
GCCAACCACG CCAAGACCGA GTTCCTGGCC GCCATCTCGC ACGAGCTGCG CACGCCGCTG
ACGAGCATCC GCGGCTTCGC CGAACTGATG GAAAAACGCA TCGAGCAGCC CAAGTTCAAG
GACCAGGCCG GCATGATCCG CCGCGCCGCC GAGCACCTGA ACGCGCTGCT CACCCAGATC
CTCGACTTCG CCAAGATCGA GGCCGGCGCG ATGCGCGTGG GCGCCACGCC GGTGGCGATC
CGCCCGCTGG TCAGGGGCAC CGCCGACTTC TTCGCGGTGA GCGCCGCCGA GAAGGGGCTG
GAACTGCGGG TGCAGATCGC CGACGACGTG CCCGAGACCC TGCTCACCGA CGAACTGCGC
CTCAAGCAGG TGCTCAACAA CCTGCTGTCC AACGCCATGA AGTTCACCGC CGGCGGCCAC
GTCGCGATCG AGGTCGAACG CGACGCCACG CAGCTGCGCC TGCACGTGGT CGACACCGGG
CCGGGCATCC CGGCCGAGCA GCACGAGCTG ATCTTCGAGC GCTTCCGGCA GGCCGACAGC
CAGGTCGCGC ACCAGCACGG CGGCACCGGC CTGGGCCTGG CGCTGTCGCG CTCGCTGGCC
GAGCTGATGG GCGGCACGCT GGGCGTGACA TCGACGCCGG GCGAAGGCGC GCGCTTCACG
CTGACGTTGC CGCTCGGCGC GCCGGCCTGA
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| Protein sequence | MLKPLHDPRA VTGTTPDSAT DAPPASRPAR LVSRWALRFM LAMLAIAWAS VLVVIGLEYR
ESMAAQARHN TNLARAFEEQ TVRVVAAVDQ ATIRMRDAVR SGAHTLADLA QFANETGMAP
TILVQLSLVG PDGRFSGSNL DPDGSKTGHV DLSTREHIRV HLSPDGAAGQ HADGLFIGKP
VLGKVSGRWT IQLSRRIDGP DGRVLGVVVA SLDPSYFENV YRSVELGRQG GVTLVGTDLA
IRARVMGDSS LGMGANIGAA SPLVSGGWQR SGDYVSASTV DGVERLVGYH RIDDYPLYVL
VSSATAESLA GWRAMRNTVL LLTALLSAAV IAAAWIFLSN VRRLEASNVA LIASEARAQS
ANHAKTEFLA AISHELRTPL TSIRGFAELM EKRIEQPKFK DQAGMIRRAA EHLNALLTQI
LDFAKIEAGA MRVGATPVAI RPLVRGTADF FAVSAAEKGL ELRVQIADDV PETLLTDELR
LKQVLNNLLS NAMKFTAGGH VAIEVERDAT QLRLHVVDTG PGIPAEQHEL IFERFRQADS
QVAHQHGGTG LGLALSRSLA ELMGGTLGVT STPGEGARFT LTLPLGAPA
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