Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4342 |
Symbol | |
ID | 6164040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4859783 |
End bp | 4860607 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641667119 |
Product | hypothetical protein |
Protein accession | YP_001793358 |
Protein GI | 171061009 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCG TCGACCTGCT GCCCTGGATC GGGGCCTATC TGGCGCTGGG TTGTGTCGGC GGCTTCGCGG CCGGCCTGCT CGGCATCGGC GGGGGCATGC TCTACGTGCC GCTGCTGGCG TGGCTGTTCG AACTGCAGCA TTTCGCGCCC GCGTCGATGC TGCATCTGGC GCTCGGCACC TCGCTGACCA CCATCATCTT CACGTCGATC TCGAGCCTGC GCGCGCACCA CGCCAAGGGC AACGTCGACT GGACGATCGT GCGCCAGATC GTGCCGGGCA TCGCCATCGG CGGGCTGATC GGCGGCGCGC TCGCCAAGCA GCTGCCGACC GCGACGCTGG CGCTGATCTT CGCGGTCTTC GTGTCGTACT CGGCCACCCA GATGTTCCTC AACGCCAAGC CCAAGCCCAG CCGCAGCCTG CCCGGCGCGG CGGGCGTGGC CGGCGTCGGC GTGCTGATCA GCACGCTGTC GCAGCTGGTG GGCGCAGGCG GCGGCTTCCT GAGCGTGCCG TTCATGACCT GGTGCAACGT CACGATCCAC CGCGCGGTGG GCACCTCGGC GGCGATCGGC CTGCCGATCG CGATCGTCGG CACCGTCGTC TACTTCCTCG GCGGCCAGAG CAGCACCGGC CTGCCGCCGG GCAGCTTCGG CTACATCTAC CTGCCCGCGC TGCTGGCGGT GCTGGTGCCC AGCGTGCTGA TGGCGCCGGT GGGCGCGCGG CTGGCGTCGA CGCTGCCGGT GGCCACGCTC AAGCGGGTGT TCGCGGGTTT CCTGTTCGTG CTGGCGCTGA AGATGCTGCA CTCGGCCGTC AAGGCCTGGG GCTGA
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Protein sequence | MNLVDLLPWI GAYLALGCVG GFAAGLLGIG GGMLYVPLLA WLFELQHFAP ASMLHLALGT SLTTIIFTSI SSLRAHHAKG NVDWTIVRQI VPGIAIGGLI GGALAKQLPT ATLALIFAVF VSYSATQMFL NAKPKPSRSL PGAAGVAGVG VLISTLSQLV GAGGGFLSVP FMTWCNVTIH RAVGTSAAIG LPIAIVGTVV YFLGGQSSTG LPPGSFGYIY LPALLAVLVP SVLMAPVGAR LASTLPVATL KRVFAGFLFV LALKMLHSAV KAWG
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