Gene Lcho_4337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4337 
Symbol 
ID6164003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4852915 
End bp4853565 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID641667114 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_001793353 
Protein GI171061004 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTCA ACCCGCAGCA CCCGTTCACT GATCCTGAAG CGGTCTATTC GCTGATGGCG 
TCTCACCCCC TGGGTGCCTG GGTGTGCCAC GGCCAGCACG GCCTGATCGC GAACCATCTG 
CCTTTTTTCC TCGATCGCAG CCGCGGGCCG CACGGCACGC TGATCGGACA CGTCTCACGC 
GCCAACACGG TCTGGCGCGA ACTCGGCCCA GCCAGGCCTT CGGTCGTGAT GTTCCAGGGG 
CCGCAGGCCT ACATCACACC GGGCTGGTAT CCGGGCAAGG CGGAGCACGG CAAGGTGGTG 
CCGACTTGGA ACTACGTGGT GGCCCATGCG CACGGGGTTG CGCGGGCGAT CGACGACCGC 
GGCTGGTTGC TCGACATGCT CAACCGGCTC GCCGATGTTC ACGAGGCCGG TCGCCCCGCG 
CCGTGGCGCG TCGGCGACGC GCCTGCCTCG TTCATCGACA AGTTGCTGCG CGCGATCGTC 
GGCATCGAGA TACCGATCGA TCGCCTCGAA GGCAAGCTCA AGGTCAGCCA GGACGAAGCC 
ATGCCGGATC GGCTCGGCAC GGTGCGCGGC CTGCAGGAGC AGGCTTCCGA CGAGGCTGGG 
CTGATGGCCG ATCTCGTCAT GCAGGCCATC AAGGCCGATG CGGCCGGCTG A
 
Protein sequence
MYVNPQHPFT DPEAVYSLMA SHPLGAWVCH GQHGLIANHL PFFLDRSRGP HGTLIGHVSR 
ANTVWRELGP ARPSVVMFQG PQAYITPGWY PGKAEHGKVV PTWNYVVAHA HGVARAIDDR 
GWLLDMLNRL ADVHEAGRPA PWRVGDAPAS FIDKLLRAIV GIEIPIDRLE GKLKVSQDEA 
MPDRLGTVRG LQEQASDEAG LMADLVMQAI KADAAG