| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4334 |
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| Symbol | |
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| ID | 6164000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4851406 |
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| End bp | 4851825 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641667111 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001793350 |
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| Protein GI | 171061001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCTGC TCGACACCAA CGTGGTGTCG GAGCCCCTGC GCCGCGCACC CGACGCCCGC
GTGATCGCGT GGATCGACGC CCAGCCGCTC GAAACGCTGT ACCTGTCCGC CATCACCGTG
GCCGAGCTGC GCGCGGGCGT GGCACTGCTG CCCGCTGGCA AGCGCCGCAC AGGTTTGCTG
GACAACCTGG AGAAACGGGT GCTGCCGCTG TTTGCTGGCC GCGTGCTGCC CTTTGACGTG
GCTTGCACCC AGGCCTATGC GGTCTTGATG GCCAAGGCGC GGGCCGCAGG GCTTGCCATT
GCGACTGCCG ATGGCTACAT CGCGGCTATC GCCGCTGCCA ACCGCTTTGC GGTGGCCACC
CGCGACACCG GCCCCTTCGA GGCGGCTGGT GCGGATGTGA TCAATCCGTG GCTGGCGTGA
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| Protein sequence | MILLDTNVVS EPLRRAPDAR VIAWIDAQPL ETLYLSAITV AELRAGVALL PAGKRRTGLL
DNLEKRVLPL FAGRVLPFDV ACTQAYAVLM AKARAAGLAI ATADGYIAAI AAANRFAVAT
RDTGPFEAAG ADVINPWLA
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