| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4322 |
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| Symbol | |
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| ID | 6161200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4836046 |
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| End bp | 4836960 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641667099 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001793338 |
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| Protein GI | 171060989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.709279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA TCCATTCCAA TCCCAAGCGC AGGCGCAGCC GCCGCAGCTG GGCCGCCTCG
ATCGCGCTGA TCCCGATGGC TCTCACCGTC GTGCTGGCCT ATGTCGGCAC GGTGCTGTGG
TCGGTGCGGG TGTCGTTCAG CAGCGCCAAG ACCTTTGCGC GCGACGACTT CGTCGGCTTC
GCGCAATACG AGCGCCTGTT CAACACCGAC CGCTGGATCG TCTCGCTGCA CAACGTGGCG
CTGTTCGGCG TGCTGTTCGT GAGCTGCTGT CTCGTGATCG GCTTCCTGCT GGCGGTGTTC
ATCGACCAGC GGGTACGGCT CGAAGGCGTG TTCCGCACCA TCTTCCTGTA CCCGTACGCG
ATGTCCTTCG TGGCCACCGG GCTGATCTGG CAGTGGATGC TCAACCCGCA GCTGGGCATC
CAGGCCAGCG TGCGGTTGAT GGGTTTCGAG AGCTTCACCT TCGACTGGAT CGTCACGCAG
GACAAGGTCA TGTACTGCAT CGTGCTGGCC GCCGTCTGGC AGGCCAGCGG GCTGGTGATG
GCGATCCTGC TGGCGGGCCT GCGCGGCGTC GACGAAGAGC TCTGGAAGGC CGCCCGCATC
GAGGGTGTGC CGCGTTGGCG CTACTACGCC AACATCGTGC TGCCGCAGCT CGCGCCCTCG
GTGGGCACGG CCTTCGTGCT GCTGTCGGTG GCGGTGGTGA AGGTCTATGA CGCAGTGGTC
GCGATGACGC AGGGCGGCCC TGGCGACGCC AGCGAAGTGC CGGCCAAGTT CATCATGGAC
CACCTCTTCA ACCGCGCCAA CATCGGCCTG GCCTCGGCCG CATCGACCGT GATGCTGCTG
ACCGTTCTGG CCCTGCTGGC GCCCTGGTGG TATGCCCGCT CGCACGCCGC GCGCAATGCC
GGGAGAGCCG CATGA
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| Protein sequence | MAQIHSNPKR RRSRRSWAAS IALIPMALTV VLAYVGTVLW SVRVSFSSAK TFARDDFVGF
AQYERLFNTD RWIVSLHNVA LFGVLFVSCC LVIGFLLAVF IDQRVRLEGV FRTIFLYPYA
MSFVATGLIW QWMLNPQLGI QASVRLMGFE SFTFDWIVTQ DKVMYCIVLA AVWQASGLVM
AILLAGLRGV DEELWKAARI EGVPRWRYYA NIVLPQLAPS VGTAFVLLSV AVVKVYDAVV
AMTQGGPGDA SEVPAKFIMD HLFNRANIGL ASAASTVMLL TVLALLAPWW YARSHAARNA
GRAA
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