| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4303 |
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| Symbol | |
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| ID | 6162086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4813757 |
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| End bp | 4815094 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667080 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001793319 |
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| Protein GI | 171060970 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG CCTCGCTTTT CATGATCGAC GCCAGCCACG ACCCGGCCCT GCGCAGCTGG
GTGGCCGGCG CCCACACGCC GGACACCGAC TTCCCGATCC AGAACCTGCC GCTGGGCATG
TTCCGCCCCG CCGGCAGCAG CGCGCTGCTG CGCCCCGGCG TGGCGATCGG CGATCGGGTG
ATCGACCTGC TGGCCGCGGT GCAGGCCGGC GTGCTGACCG GCGCTGCCGC CGATGCGCTG
CAGGGCACCG AAGCCGGCAC GCTGAACCCG CTGATGGACC GCGGTGCGGC CGGCCGGCGT
GCGCTGCGCA CGGCGCTGTC GGCCGCGCTG GCCGAGGGCA GCGCCGCACA GGCCGCGCTG
CAGCCGTGCC TGCACGCGCT CGACGCGGTC GAGCTGGGCC TGCCCTGCCG CATCGGCGAC
TACACCGACT TCTACACCGG CATCCACCAC GCCACCACGG TGGGCCAGCT GTTCCGCCCC
GACAACCCGC TGCTGCCCAA CTACAAGTGG GTGCCGATCG GCTACCACGG CCGGGCCTCG
TCGATCCGCG CCAGCGGCCA TGCCGTCGTG CGCCCGCACG GGCAGATCAA GGGCCCGAAC
GACGAGGTGC CGGTCTACGC GCCGACCCGG CGCCTCGACC ACGAGCTCGA AGTGGGCGTG
CTGATCGGCG GCGGCAATGC GCTGGGCGAG CCGATCGCGA TCGAGCAGGC CGAGGACCAT
TTCTTCGGCC TGGTGCTGCT CAACGACTGG TCGGCGCGCG ACGTGCAGGC CTGGGAGTAC
CAGCCGCTCG GCCCCTTCCT GTCCAAGAGC TTCGCCAGCA CGATCTCGCC GTGGATCGTC
ACGCCCGAGG CGCTGGCGCC GTTCCGCGCG CCGTTCGGCC GCCCGGCCGG CGACCCGCAG
CCGCTGCCCT ACCTCGACAG CGCCGCCAAC CGCGCGGCCG GCCACATCGA CCTGACGCTG
GAGGTGTGGC TGCAGACCGC GCAGATGCGC GCCGACGGCC TGCCGCACGA GCGCCTGATG
GCGTCGAACT TCACCGACGC CTACTGGACG CTGGCGCAGC TGATCACCCA CCACACCAGC
AACGGCTGCG ACCTCGGCAG CGGCGACCTG CTGGGCTCGG GCACGCTCTC GGGGCCCGAC
CCGAAACAAG GGGGCTCGCT GCTGGAGCTT TCGCTCGGCG GCAAGCAGCC GCTGACGCTG
GCCAACGGCG AGCAGCGCAC CTTCCTGCAG GACGGCGACA GCGTGCTGCT GCGCGGTCAT
TGCGCCCGAC CCGGCGCCGT GCGCATCGGT TTCGGCGCCT GCGAGGGCCG GGTGCTGCCG
GCGCATCAGC GGGGCTGA
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| Protein sequence | MSPASLFMID ASHDPALRSW VAGAHTPDTD FPIQNLPLGM FRPAGSSALL RPGVAIGDRV
IDLLAAVQAG VLTGAAADAL QGTEAGTLNP LMDRGAAGRR ALRTALSAAL AEGSAAQAAL
QPCLHALDAV ELGLPCRIGD YTDFYTGIHH ATTVGQLFRP DNPLLPNYKW VPIGYHGRAS
SIRASGHAVV RPHGQIKGPN DEVPVYAPTR RLDHELEVGV LIGGGNALGE PIAIEQAEDH
FFGLVLLNDW SARDVQAWEY QPLGPFLSKS FASTISPWIV TPEALAPFRA PFGRPAGDPQ
PLPYLDSAAN RAAGHIDLTL EVWLQTAQMR ADGLPHERLM ASNFTDAYWT LAQLITHHTS
NGCDLGSGDL LGSGTLSGPD PKQGGSLLEL SLGGKQPLTL ANGEQRTFLQ DGDSVLLRGH
CARPGAVRIG FGACEGRVLP AHQRG
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