| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4294 |
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| Symbol | |
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| ID | 6161778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4804820 |
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| End bp | 4805944 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641667071 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001793310 |
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| Protein GI | 171060961 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAG TGCTTCAACC AGAACCCATC CGCGCCGCCC TGGCTGCCAA GGGGTGGGAT
CAGAAACAGC TGGCGCAGAC GATCGGTGTC AGTGCCCAGG CCGTCACCAA CTGGATGAAG
GGGGAAGATT TCCCCCGGCC GGCCACCCTT CTCAAGCTCG CGACAGCCTT GTCGCTCAGC
TTTGACGAGC TGGTGCATCT GCCGCAACGG GACGAACCGA TCATCGCGTT CCGCAAGAAG
ACGGGCACCA AGACGACCGA CGAACATGTG CTGCGGGCCA AGGCGATGGG CGCCCTGCTC
AAGCCTCTGG TGCCGTTTTT GCCCCCGCGC AAGGCCCTGC GCACCCAGAT CCCATCGGCC
TCGACCGAGT ACGAACTTCT GCAGAACGCA GCAGCATCGG TGCGCGCGAA GTTGGGCATC
GGCGCTGAGT CGGTGCTGAC CTACGAGCGT CTCATCGCCG AGTTCGACGC CAACGATGCG
GTGCTCATCC CGGTGATGTG GGGAAAGAAA GACCGTCACG AAAACGCCTT GCACATCCTG
CTGCCTGGCG ATCAAGTAAC GTTCATCTAC TTGAACCTCG ACACCCATCT CGAAGACTTC
AAGTTCTGGA TGGCGCATGA GCTGGCGCAC GTCTACACGC CCGACCTCGC CGGCAAGGAC
GCGGGAGAAG ACTTCGCGGA TGCGTTCGCG GGCAGCCTGC TGTTCCCGCG TGAACTGGCC
CGGCATGCGT ATGCGGAGGC CAGCCGTGCC CCGACCGCTG CGGCCGAAAT GCAGGCGCTG
CAACAGTTTG CGCATCAGCA CATGATCTCG CTGTTCACCG TCTACACACA GGTGAGCCGG
CATGCGACGG CTGCAGGATT GCGGCCCCTG CGAGTGGCAG ACAAGAGCAT CCACGCGGTG
CGCAACAGCG GACGCGGTGC GCTGGTCAGC CAGGCATTGT TCGAGCCGAT GCCGCCCGAT
CCGTCGACCT ACATCGCCGC GGCTCACAAC GTCTTTCAGT CGGCGTTTTT CCCGGCCCTG
CGACGCATGC TGCACGAACG CGGCACCGGG GTCGGCTACG TTCAACAACT GCTCGATGCG
TCGATCGCCG ATGCGCAGGC CCTGCACACC GAGTTGATCC GTTGA
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| Protein sequence | MQRVLQPEPI RAALAAKGWD QKQLAQTIGV SAQAVTNWMK GEDFPRPATL LKLATALSLS
FDELVHLPQR DEPIIAFRKK TGTKTTDEHV LRAKAMGALL KPLVPFLPPR KALRTQIPSA
STEYELLQNA AASVRAKLGI GAESVLTYER LIAEFDANDA VLIPVMWGKK DRHENALHIL
LPGDQVTFIY LNLDTHLEDF KFWMAHELAH VYTPDLAGKD AGEDFADAFA GSLLFPRELA
RHAYAEASRA PTAAAEMQAL QQFAHQHMIS LFTVYTQVSR HATAAGLRPL RVADKSIHAV
RNSGRGALVS QALFEPMPPD PSTYIAAAHN VFQSAFFPAL RRMLHERGTG VGYVQQLLDA
SIADAQALHT ELIR
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