Gene Lcho_4283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4283 
Symbol 
ID6160630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4793282 
End bp4793623 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID641667060 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_001793299 
Protein GI171060950 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCG TGCCGTCGTG CCCCCAATGC CAATCCGAAT TCGCCTATGC GGACGGCAAT 
CAGTTCATCT GCCCGGAATG CGGCCATGAA TGGAGCGCTG CATCCGCCGC CAGCGCAGAA
GAACAAGTCC GGGTCTGGAA AGACGCCTAC GGCAATGCAC TCCATGACGG CGACTCGGTC
ACCGTCATCA AGGACCTGAA GATCAAGGGA TCTTCTGCAG TCGTCAAGGT CGGCACCAAG
GTCAAGAACA TCCGCCTGAT CGAAGGTGAC CACGACATCG ACTGCAAGAT CGAAGGCTTC
GGCTCGATGC AATTGAAGTC CGAGTTCATC AAGAAGGCCT GA
 
Protein sequence
MSGVPSCPQC QSEFAYADGN QFICPECGHE WSAASAASAE EQVRVWKDAY GNALHDGDSV 
TVIKDLKIKG SSAVVKVGTK VKNIRLIEGD HDIDCKIEGF GSMQLKSEFI KKA