Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4283 |
Symbol | |
ID | 6160630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4793282 |
End bp | 4793623 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641667060 |
Product | alkylphosphonate utilization operon protein PhnA |
Protein accession | YP_001793299 |
Protein GI | 171060950 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism |
TIGRFAM ID | [TIGR00686] alkylphosphonate utilization operon protein PhnA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCG TGCCGTCGTG CCCCCAATGC CAATCCGAAT TCGCCTATGC GGACGGCAAT CAGTTCATCT GCCCGGAATG CGGCCATGAA TGGAGCGCTG CATCCGCCGC CAGCGCAGAA GAACAAGTCC GGGTCTGGAA AGACGCCTAC GGCAATGCAC TCCATGACGG CGACTCGGTC ACCGTCATCA AGGACCTGAA GATCAAGGGA TCTTCTGCAG TCGTCAAGGT CGGCACCAAG GTCAAGAACA TCCGCCTGAT CGAAGGTGAC CACGACATCG ACTGCAAGAT CGAAGGCTTC GGCTCGATGC AATTGAAGTC CGAGTTCATC AAGAAGGCCT GA
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Protein sequence | MSGVPSCPQC QSEFAYADGN QFICPECGHE WSAASAASAE EQVRVWKDAY GNALHDGDSV TVIKDLKIKG SSAVVKVGTK VKNIRLIEGD HDIDCKIEGF GSMQLKSEFI KKA
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