| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4251 |
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| Symbol | psd |
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| ID | 6163647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4761317 |
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| End bp | 4762174 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641667028 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001793267 |
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| Protein GI | 171060918 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGCCT TGTCCGACCG CCTTGCCGTC CTGCCGCAAT ACCTGCTGCC CAAACAGGCC
CTGACCGCAT TGGCGGGCCG GGTCGCCTCG GCGCAAGCCG GCGCCGTCAC CACCGGCATC
ATCCGCCGCT TCGTGCGCCG CTACGGCGTC GACATGAGCG AGGCGGCCGA GCCCGACATC
GCCCGCTACA CCAGCTTCAA CGCCTTCTTC ACCCGCGCGC TGCGCCCGGG TGTGCGGCCG
CTGGCGAACG CCGACCTGAT CTGCCCGGTC GACGGCGCGA TCAGCCAGCT CGGCGCGATC
GAGGGCGACC AGATCTTCCA GGCCAAGGGC CACCGCTACA GCAGCACGGC GCTGCTGGGC
GGCGACGCCG TGCTGGCGGC GCAGTACACG AATGGCCACT TCGCGACGAT CTACCTCAGC
CCGCGCGACT ACCACCGCAT CCACATGCCG TGCGACGGCC GGCTGCTGCG CATGATCCAC
GTGCCGGGCG CGCTGTTCTC GGTCAACCCG ACCACCGCGC GCGGCGTGCC CGGGCTGTTC
GCTCGCAACG AGCGGGTGGT CTGCATCTTC GACGGCCCGA CCGGGCCGTT CGCGCTGGTG
CTGGTGGGTG CCACCATCGT CGGCAGCATG GCCACCGCCT GGCACGGCGT GGTCAACCCG
CCGCGGCCGG GCCAGCTGCG CGAATGGAAC TACGAGCGCG AAGACATCCG CCTGGCCCAG
GGCGACGAGA TGGGCCGCTT CCTGCTCGGC TCGACGGTGG TGATGCTGTT CCCGGCCGGG
CCGCTGACGT TCAATCCGCA ATGGACCGCG GCCCGGCCGG TGCGGCTCGG CGAGGCGATG
GCCGACGGCC TGCGCTGA
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| Protein sequence | MPALSDRLAV LPQYLLPKQA LTALAGRVAS AQAGAVTTGI IRRFVRRYGV DMSEAAEPDI
ARYTSFNAFF TRALRPGVRP LANADLICPV DGAISQLGAI EGDQIFQAKG HRYSSTALLG
GDAVLAAQYT NGHFATIYLS PRDYHRIHMP CDGRLLRMIH VPGALFSVNP TTARGVPGLF
ARNERVVCIF DGPTGPFALV LVGATIVGSM ATAWHGVVNP PRPGQLREWN YEREDIRLAQ
GDEMGRFLLG STVVMLFPAG PLTFNPQWTA ARPVRLGEAM ADGLR
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