Gene Lcho_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4239 
Symbol 
ID6161128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4749061 
End bp4749336 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content65% 
IMG OID641667016 
Producthypothetical protein 
Protein accessionYP_001793255 
Protein GI171060906 
COG category[S] Function unknown 
COG ID[COG2921] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA TTCCGCGCGA ACAATCGCTG ATCGAATACC CGAGCGCCTT CCCGATCAAG 
GTGATGGGTG CCCATGTGCC GGGTTTCCTC GAAGCCATCG TCGAGATCGC CCTGCGCTTC
GACCCGGCCT TCGCGCCCGA CAGCGTCGAG CAGCGGCCCA GCAAGGCGGG CAACTACCTG
GGCCTGACGA TCACCGTCAC CGCCACCAGC CGCGACCAGC TCGACGCGCT CTACCGCGAG
CTCAGCGGCC ACCCGATGGT CAAGATCGTG CTGTGA
 
Protein sequence
MQDIPREQSL IEYPSAFPIK VMGAHVPGFL EAIVEIALRF DPAFAPDSVE QRPSKAGNYL 
GLTITVTATS RDQLDALYRE LSGHPMVKIV L