Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4237 |
Symbol | |
ID | 6161126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4746863 |
End bp | 4748032 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641667014 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001793253 |
Protein GI | 171060904 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.507304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CCCATCCCTT GCCCCGCCTG CTGGCCACGC TGGCGCTTGG CCTGAGCCTG AGCCTGAGCT TCGGCGCCCT GGCGCAGACC GCGCCGCCCG AAGTGGCGGC ACGCGCCTAC CTGCTGCTCG ACGTCAGCGC CAACCAGGTG CTGGCCGAGC GTGACGCCGA CGCCACCGTC GAGCCCGCGT CGCTGACCAA GCTGATGACC GCCTACCTGG TGTTCCAGGC GCTGCGCGAC AAGAAGCTCG CGCTCGAACA GGAGCTGACG GTGTCCGAGC GCGCCTGGCG CACCGGCATG ACCGACACCT CGCGCATGTA CATCCAGGTC GGCACCAAGG TGAAGGTCGA GGACCTCATC AAGGGCATGA TCGTGCAGAG CGGCAACGAC GCCACCGTGC AGCTGGCCGA GGCGGTGGGC GGCACGCTCG AGAACTTCGT CGTGCTGATG AACCGGCAGG CACAGGCCTT CGGCCTGAAG GTGACGCAGT TCAGGAACCC CGAGGGCCTG CCCGCGCCCG GCCATGTCAG CACCGCGCGC GAGCTGTCGA TCATCGCCAG CCGGCTGCTG GTGGACTTCC CGGCCGAGGC GCGGTACTAC ACGCTCAAGG AATTCACCTT CAACAAGATC AAGCAGCCCA ACCGCAACCT GCTGCTGTGG CGCGACCCGA CGGTCGACGG CCTCAAGACC GGCTACACCG ACAACGCCGG CTACTGCCTG ATCGCCACCG CCAAGCGCGA CCTGCCGGCC GGCCAGCGCC GGCTGGTCAG CGTGATCCTG GGTGCGTCCT CGAAGGAAAG CCGCGCGACC GAAGCGCAGA AGCTGCTCAA CTGGGGCTAC AGCGCCTGGG ACGCGATCAA GCTCTACGAC GCGCGGCAGA CCATCACCAC CGCGCCGGTC TGGAAGGGCG CCAGCGCCAC CGCCAAGCTC GGCACGCTCG TGCCGCTGGT CGTCACGGTG CCACGTGGCG AAGGCAGCCA GCTCAAGACC GAGATCACGC GCACCGACCC GCTGCTGGCG CCGCTGACCG CCGGCCAGCC GGTCGGCACG CTGAAGGTGG TGTCGGGCAG CCGCGTGCTG ACGCAGATGC CGGTCACCGT GACCGAGGAC GTGCCGGTCG CCGGCCTGTT CGGCCGCATG TGGGACAGCG TGCGCCTGAT GGTGCGATGA
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Protein sequence | MTRSHPLPRL LATLALGLSL SLSFGALAQT APPEVAARAY LLLDVSANQV LAERDADATV EPASLTKLMT AYLVFQALRD KKLALEQELT VSERAWRTGM TDTSRMYIQV GTKVKVEDLI KGMIVQSGND ATVQLAEAVG GTLENFVVLM NRQAQAFGLK VTQFRNPEGL PAPGHVSTAR ELSIIASRLL VDFPAEARYY TLKEFTFNKI KQPNRNLLLW RDPTVDGLKT GYTDNAGYCL IATAKRDLPA GQRRLVSVIL GASSKESRAT EAQKLLNWGY SAWDAIKLYD ARQTITTAPV WKGASATAKL GTLVPLVVTV PRGEGSQLKT EITRTDPLLA PLTAGQPVGT LKVVSGSRVL TQMPVTVTED VPVAGLFGRM WDSVRLMVR
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