Gene Lcho_4203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4203 
Symbol 
ID6161895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4710724 
End bp4711386 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641666980 
Productcarbonate dehydratase 
Protein accessionYP_001793219 
Protein GI171060870 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000488965 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCG AACTGCAAGA ACTCTTTCAG AAGAACCGCG ACTGGGCTGC CGACGTCGAG 
CAGAACGAGC CCGGTTTCTT CTCGCGCCTG CTCGTGCAGC AGACCCCGCA ATACCTCTGG 
ATCGGCTGTG CCGACAGCCG CGTGCCGGCC AACGAGCTGG TCGGGCTGCT GCCCGGCGAG 
CTGTTCGTGC ACCGCAACGT CGCCAACGTG GTGGCGCACT CGGACCTGAA CGCGCTGTCG 
GTGATCCAGT TCGCGGTCGA CGGGCTGAAG GTGCAGCACA TCATCGTGGT CGGCCATTCC 
AACTGCGGCG GCGTGCGCGC GGCGCTGCAG GACCTGCGGC TGGGCCTGGT CGACAACTGG 
ATCCGCCACG TCAAGGACGT GCGCAACCTG CACGCCGCGC TGCTTGAAGA AGTGCCGCCG 
GAGCGCCGCA TCGACGCACT GGTCGAGCTC AACGTGCTGG AGCAGGCGCA CAACGTCTGC 
GACACCACCG TCGTGCAGGA CGCCTGGAGC CGCGGCCAGG ACGTGGTCGT GCACGGCTGG 
GTCTACGGCC TGCACAACGG CCTGCTGGAA GACCTCAACA TCACCGCCCG CACCCCGGCC 
GACGTGCCCG CCGCCTACCA GCGCGCGCTG GCCGGCATCC GCGCGCGCTA CGTGGCGGCC 
TGA
 
Protein sequence
MSTELQELFQ KNRDWAADVE QNEPGFFSRL LVQQTPQYLW IGCADSRVPA NELVGLLPGE 
LFVHRNVANV VAHSDLNALS VIQFAVDGLK VQHIIVVGHS NCGGVRAALQ DLRLGLVDNW 
IRHVKDVRNL HAALLEEVPP ERRIDALVEL NVLEQAHNVC DTTVVQDAWS RGQDVVVHGW 
VYGLHNGLLE DLNITARTPA DVPAAYQRAL AGIRARYVAA