| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4200 |
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| Symbol | |
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| ID | 6161385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4708432 |
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| End bp | 4709523 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666977 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001793216 |
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| Protein GI | 171060867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000948581 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAACC TGCTCGAACA CCAACTGGTT TATCCGCTCG CCGATCAGCT GCCCGAACCC
GGCCGCACGC TCGAGGTGGC GCCCGGCGTG CGCTGGGTGC GGATGGGGCT GCCGTTTGCG
CTCGACCACA TCAACCTCTG GCTGCTGCGT GACCGCATCG ACGGCCGCGA GGGCTGGACC
GTGGTCGACT GCGGCATCAC CAACGACGCC ACCCGCGACG CCTGGGAGCA GGTCTTCGCC
GACGAACTCG GCGGCCTGCC GGTGCTGCGG GTGATCGTCA CGCACATGCA TCCCGACCAC
ATCGGGCTGT CGAACTGGCT GTGCGAGCGC TGGACGACAC CCGAGCATGA ATGCCGCCTC
TGGATCAGCG CCACCGACTG GAACGCCGCG CGCATCGCCA GCACCCGCAC CACCGGCTTC
GGCGGCGAGG CGGCGGCGGC GTTTTTTGCC AGCCACGGCC TGGTCGATCC CGAGGCCCAG
GCCAAGGTGC GCGCGCGTGG CAACTACTAC GGCAGCATGG TGCCGGCGGT GCCGCAGCAG
TTCCGCCGCC TGCTCGACGG CATGAAGCTG CAGACGGTGG ACGAGGGGGG TGCTGTCCAC
GACTGGTTCT GCCACGCCGG CTACGGCCAC GCGCCCGAGC ACATCAGCCT GCATGCGCCG
TCGCTGGGCG TGCTGATCTC GGGCGACATG GTGCTGCCGC GCATCTCCAC CAACATCAGC
GTGATCGACA TCGAGCCCGA GGCCGACCCG CTGCCGCTCT ACCTGGCCTC GCTCGACCGC
ATGCGCGCGC TGCCGGCACA CACGCTGGTG CTGCCGTCGC ACGGCAAGCC GTTCCGCGGC
CTGCACGAGC GCGTCGCGCA ATTGCACGCG CACCACGACG AACGTCTGGC CGAGGTGATG
GCCGCCTGCG TGGCGCGGCC GTCGAGCGCG GCCGACATCC TGCCGGTGAT GTTCAAGCGC
CCGCTCGACC TGCACCAGAT GACCTTCGCG ATGGGCGAGG CGGTGGCGCA CCTGCATGCG
CTGTGGCTGG CCGGGCGGCT CGGACGCAGC CGCGGTGCCG ACGGCGTGTG GCGCTTCGCG
CCGGCCGCCT GA
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| Protein sequence | MANLLEHQLV YPLADQLPEP GRTLEVAPGV RWVRMGLPFA LDHINLWLLR DRIDGREGWT
VVDCGITNDA TRDAWEQVFA DELGGLPVLR VIVTHMHPDH IGLSNWLCER WTTPEHECRL
WISATDWNAA RIASTRTTGF GGEAAAAFFA SHGLVDPEAQ AKVRARGNYY GSMVPAVPQQ
FRRLLDGMKL QTVDEGGAVH DWFCHAGYGH APEHISLHAP SLGVLISGDM VLPRISTNIS
VIDIEPEADP LPLYLASLDR MRALPAHTLV LPSHGKPFRG LHERVAQLHA HHDERLAEVM
AACVARPSSA ADILPVMFKR PLDLHQMTFA MGEAVAHLHA LWLAGRLGRS RGADGVWRFA
PAA
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