| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4110 |
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| Symbol | |
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| ID | 6160661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4614769 |
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| End bp | 4616052 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641666888 |
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| Product | ATPase-like protein |
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| Protein accession | YP_001793127 |
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| Protein GI | 171060778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4637] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000135453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCGAT GGATCGAGGT CAAGGGCCTG CGCGCTCTGC GTTACGTGTC CCTGGGACTC
GATCCATTCA TGGTCATGGT GGGGCCGAAT GCTTGTGGGA AAAGCACGCT GTTTGATGCG
CTGCTGTTTG TGCGCGATGT TCTGAGCAGC AGTCTGGACG CCGCAGTCTT TGGCAATGCC
CGCTTGAACA TCGCCCCGCG AGCGGTGTCG CCTCAAGATC TCACTTGGCT CCGACAAGGG
GGCGGCATAG AGATCGCAGT GACCTTGGCG TTGCCGGACG AGCTGATCAG CAAACTCGGT
GGCAAATATC GGTTTGCGCG CTATGAACTT GCCGTTCACA CAGACGGACG ACTGGGGTTC
GATCACGAGA CGCTGTGGTT GTGTCCTGAC CTGCGCAATC CGCAGTCCTT GCCGCAAGAA
TCGCAACAAC GACTTGACTT CCCGGAGCCT AAAGTCGGGC CTGCTCACGT CATCACACCA
TCCAAACATC GATCTCCGAA TGGTTGGCGC AAAGTGGTGA GCAAGGTGGT CGAGAGCGGC
AATGACTATT TCCGATCGGA AACCTCAGAC TGGAACAACC TGTTCCGTCT CGGTCCAGCC
AAGAGTGCGT TGGCCAATCT GCCTGAAGAT GAGCTGAAAT TCCCAGCCGC TACTTGGGTC
AAGCGCGTCT TGATGGAAGG TGTGCATCGT TTGGCTCTGA ACGCAGAGAA AATGCGCATG
CCTTCTCCGG CGGGTTCGTC CTCCGACTTT CTGCCTGACG GATCGAATTT GCCCTGGGTT
GTTCACGAGT TGGAGAAAAG CCCGGCCCTC AAACGTCGGT GGATCGCACA TATCGCCACA
TCGCTCGAAG ATCTCGTCGA CATCAAGACG CAAGAAAAAC AGGAAGATCG TTCCCGGTAC
ATTGAACTGC ATTACCGCAG CGGCCTGGAA GCTCCTTCTT GGGTCTTGTC GGATGGCACG
CTGAGGCTTC TGGCCCTGAC ATTGCTGGCT TATGCACCCA CCTCTCCAGC CATCACGCTG
ATTGAAGAAC CAGAAAATGG CATCCATCCC AAGGCGATGG AAACGGTGAT GCAGTCTCTG
GAGTCGGTGT ATGGATCACA GATCCTTTGT GCCACTCACT CACCCGTGGT GTTGAGTCAG
TTGCGTCCGC AACAGATCCT GTGTTTTGGC AAGACCGATG AAGGGGCCGT CGACATCGTT
CGTGGCGATG AACATCCTGG TCTCCAGAAA TGGCGGTCCG CGCTCAATCT GGGCGATCTG
TTCGCCACGG GGGTACTGGG GTGA
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| Protein sequence | MIRWIEVKGL RALRYVSLGL DPFMVMVGPN ACGKSTLFDA LLFVRDVLSS SLDAAVFGNA
RLNIAPRAVS PQDLTWLRQG GGIEIAVTLA LPDELISKLG GKYRFARYEL AVHTDGRLGF
DHETLWLCPD LRNPQSLPQE SQQRLDFPEP KVGPAHVITP SKHRSPNGWR KVVSKVVESG
NDYFRSETSD WNNLFRLGPA KSALANLPED ELKFPAATWV KRVLMEGVHR LALNAEKMRM
PSPAGSSSDF LPDGSNLPWV VHELEKSPAL KRRWIAHIAT SLEDLVDIKT QEKQEDRSRY
IELHYRSGLE APSWVLSDGT LRLLALTLLA YAPTSPAITL IEEPENGIHP KAMETVMQSL
ESVYGSQILC ATHSPVVLSQ LRPQQILCFG KTDEGAVDIV RGDEHPGLQK WRSALNLGDL
FATGVLG
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