| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4066 |
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| Symbol | |
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| ID | 6162152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4555185 |
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| End bp | 4556816 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666844 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001793083 |
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| Protein GI | 171060734 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000310609 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGCCT ACCCCGCGCA GCTGGGCAAG TACCGCATCA CCGGCGTGCT CGGGCGCGGC
GCGATGGGCG TGGTCTACAA GGCCGAGGAC CCGGTGATCC GCCGCCCGGT GGCGATCAAG
ACCATCCAGC AGCACAGCGC CACCTACGCC GACCCGCAGG CCAAGGCGGC GGCGCGCTTT
CGCAACGAGG CGCAGGCGGC CGGGCGGCTG CTGCACCCGG GCATCGTGGC GGTCTACGAA
TACGGCGAGC AGGACGAGGT GGCCTTCATC GCGATGGAGT ACGTCGAGGG CCAGACCCTC
GCGCACTTCC TGCAGCAGAA GATCGCGCTG ACCGACGCCG ACATCCTGAG CGTGATGGTG
CAGCTGCTCG AGGCGCTCGA ACACGCGCAC GAGATGGGCG TCTGGCACCG CGACATCAAG
CCCTCGAACC TGATCGTGAC GCCGCGCGGG CGGGTCAAGG TCAACGACTT CGGCATCGCC
CGCATCGAGA ACAGCGACCT CACGCAGATG AACGTGCTGA TCGGCACGCC GCACTACATG
GCGCCCGAGC AGTACCTCGA CGGCCCGATC GATCGCCGCG TCGACCTCTG GGCCGCCGGC
GTGCTGCTCT ACCAGCTGCT GACCGGGCGC CTGCCGTTCA TCGGCGCACC CGATGCGGTG
ATGTACCAGG TCATGCACCA GACGCCGCTT GCGCCCTCGG CGCTGGCGCC GGCGCGACCG
CCCTGGTACG ACGCCATCGT GCGCCGCGCG CTGGCCAAGC AGCGCGACGC CCGCTACGCC
AGCGCCGCGC TGTTCATGCA GGACCTGCTC GGCGCGGCCA CCGCACCGGC GCCGCCGACG
ATCTCGGAGC AGACCGTCGT GCGGGCGGCG TCCAGCGTGC GGCGCGTCGG CCTGCCGATG
CCCGAGGGTT ACGGCACCGC CACCGGCAGC CCGAGCAGCG CCTTCGGTGC CGAGGCCCAG
CCGCACGGCA CGCCGCAGCC GCGTGCGTTG AGTGGCTCAT ACGCCGAGCC ACTCGGCTTT
GCGCAGCCAC CGCCCGCGTC GGGCACGACC CTCGCGCCAC CGGGCTGGGA TCCCGCCATG
CTCACCCGCA TCGAGGCCGA ACTGGCGCGC CATGTCGGCC CGGTCGCCCG GGTGCTGGTC
ACGCGCGCGG CGCGCCAGTG TTCGGACGTC GAGAGCCTGC GCAGCCGCCT GGCCGTGCAC
CTGGCCGACG GGGCCGTGCG CGAACGCTTC ATCCACCCCG ACGGCGACCC GTCGACACGC
GCCCGCGCAT CGGCCTTCGG CCCCGGCGGC CCGGGCTCGG GCTTCGCGGC CAGCGGCCTG
GAGCCGAGCT TTGCATCGAT CACCGGCGGG GGCAGCAGCG GTGAGGGTGG CCGCGGTGCA
CCGGCGGCCG GCCCGGCCAG CGGCTTCGGC GCCAGCGAGC TGCCGGTCCC GCCACAGCCG
CCGTCCGATG CGCTGATCGC CCAGGCCACC CGGCTGCTGA GCGAGCGCCT CGGCCCGATC
GCCCGCGTGC TGACCCGGCG TGCCGCGCAG GATTGCGACA GCGGCGAGCT GTTCGTCCAG
CGCGTGCTGG CGCATCTGCA GGACGAGGGC GAGCGCCAGC GGGTCGGTCA GGCGCTGGCG
GGCTTGCGTT GA
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| Protein sequence | MDAYPAQLGK YRITGVLGRG AMGVVYKAED PVIRRPVAIK TIQQHSATYA DPQAKAAARF
RNEAQAAGRL LHPGIVAVYE YGEQDEVAFI AMEYVEGQTL AHFLQQKIAL TDADILSVMV
QLLEALEHAH EMGVWHRDIK PSNLIVTPRG RVKVNDFGIA RIENSDLTQM NVLIGTPHYM
APEQYLDGPI DRRVDLWAAG VLLYQLLTGR LPFIGAPDAV MYQVMHQTPL APSALAPARP
PWYDAIVRRA LAKQRDARYA SAALFMQDLL GAATAPAPPT ISEQTVVRAA SSVRRVGLPM
PEGYGTATGS PSSAFGAEAQ PHGTPQPRAL SGSYAEPLGF AQPPPASGTT LAPPGWDPAM
LTRIEAELAR HVGPVARVLV TRAARQCSDV ESLRSRLAVH LADGAVRERF IHPDGDPSTR
ARASAFGPGG PGSGFAASGL EPSFASITGG GSSGEGGRGA PAAGPASGFG ASELPVPPQP
PSDALIAQAT RLLSERLGPI ARVLTRRAAQ DCDSGELFVQ RVLAHLQDEG ERQRVGQALA
GLR
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