Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4050 |
Symbol | |
ID | 6163237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4536641 |
End bp | 4537429 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641666828 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001793067 |
Protein GI | 171060718 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000121179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGTCTGG TCAGCCTCAA CCTCAACGGC ATCCGTTCTG CAGTGAACAA GGGTCTGATC CCGTGGGTGG AGGCAGCTGA GATCGATTGT ATGGGGGTGC AGGAGCTCAA GGCCCAGCAC GCCGACCTGA CGGCGGACAT GACCGTGCTG CACGGCATGC AGGGCCATTT CCACTGCGCC GAGAAGAAAG GCTACTCCGG CGTGGGCCTC TACAGCCGCC ACGAGCCGAG CGACGTCGTG ATCGGCCTGG GCCATGCCGA CTTCGATGCC GAGGGCCGCT ACGTCGAGGC CCGCTACGAC ACGCCGCAGC GGAAACTTTC CATCATCAGC TGTTACTTCC CGAGCGGATC TTCAGGCGAC GAACGCCAGC AGGCCAAGTT CCGTTTCCTC GACCTGATCG AGCCGCACCT GCGCGCGCTG AAGGCCGGGC GCGAGTTCGT CCTGATGGGC GACGTCAACA TCGCCCACCA GGAAATCGAC CTGAAGAACT GGAAGGGCAA CCTGAAGAAC AGCGGCTTCC TGCCCGAAGA GCGCGCCTGG ATGACCCGCC TGCTCGGCGA CACCGGGCTG GTCGACGTCT ACCGCCGGCT GCGCCCCGAC GCCACCGACG AGGCCTACAC GTGGTGGAGC AACCGCGGTC AGGCACGGGC CAAGAACGTG GGGTGGCGGA TCGACTATCA CCTGGCGACG CCGGGTCTGG CCGCGACGGC ACGGGAGACC TCGATCTACA AGGCGCAGTG GTTCAGCGAC CACGCGCCGT TGACGATCGA TTACGACTTC GATCTGTAA
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Protein sequence | MRLVSLNLNG IRSAVNKGLI PWVEAAEIDC MGVQELKAQH ADLTADMTVL HGMQGHFHCA EKKGYSGVGL YSRHEPSDVV IGLGHADFDA EGRYVEARYD TPQRKLSIIS CYFPSGSSGD ERQQAKFRFL DLIEPHLRAL KAGREFVLMG DVNIAHQEID LKNWKGNLKN SGFLPEERAW MTRLLGDTGL VDVYRRLRPD ATDEAYTWWS NRGQARAKNV GWRIDYHLAT PGLAATARET SIYKAQWFSD HAPLTIDYDF DL
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