Gene Lcho_4049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4049 
SymbolpyrE 
ID6163236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4535930 
End bp4536625 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID641666827 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001793066 
Protein GI171060717 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value3.86035e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGACG ACCCTTTGGC CCAGTCCACG ACCGACAACC TGGCGCAGGA TTTCGTGTCC 
TTTGCCGTCG ATGCGGGGGT GCTGAGGTTC GGGGAGTTCA AGACCAAGGC CGGGCGGCTG
TCGCCCTATT TCTTCAATGC CGGCCTGTTC GACGACGGCG CCAAGCTGGG CCGTCTGGCG
CAATTCTATG CACGCCGGCT GGTGGCTTCG GGGCTGCAGT TCGACATGCT GTTCGGCCCC
GCCTACAAGG GCATCACGCT GGCCGCGGCG GTGGCCATCG AGCTGGCGCG GCTCGGCCAC
AACGTGCCTT ACGCCTACAA CCGCAAGGAA GCCAAGGACC ACGGCGAGGG TGGCACGCTG
GTCGGCGCGC CGGTGCGCGG GCGGGTGCTG ATCATCGACG ACGTGATCTC CGCGGGCACT
TCGGTGCGCG AGTCGATCGC GATGATCCGC GCCGCCGGCG CCGAGCCCTG CGGCGTGACG
ATCGCGCTCG ACCGCCAGGA GAAGGCCAGC GCCGAGGGTG TCGACGCGCC GCATTCGGCG
GTGCAGTTCG TGCAGCGCGA GCTCGGCCTG GCGGTGGTGG CGATCGCCAC GCTCGACGAC
CTGCTGCAGT TCCTGTCGGT GCAGAGCAAT GCCGTGCTGG CCAGCCACCT GCCCGCGGTG
CAGGCCTATC GCGGCCGCTA CGGAGTGGCG CAGTGA
 
Protein sequence
MNDDPLAQST TDNLAQDFVS FAVDAGVLRF GEFKTKAGRL SPYFFNAGLF DDGAKLGRLA 
QFYARRLVAS GLQFDMLFGP AYKGITLAAA VAIELARLGH NVPYAYNRKE AKDHGEGGTL
VGAPVRGRVL IIDDVISAGT SVRESIAMIR AAGAEPCGVT IALDRQEKAS AEGVDAPHSA
VQFVQRELGL AVVAIATLDD LLQFLSVQSN AVLASHLPAV QAYRGRYGVA Q