| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4049 |
|---|
| Symbol | pyrE |
|---|
| ID | 6163236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4535930 |
|---|
| End bp | 4536625 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641666827 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_001793066 |
|---|
| Protein GI | 171060717 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000000386035 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACG ACCCTTTGGC CCAGTCCACG ACCGACAACC TGGCGCAGGA TTTCGTGTCC
TTTGCCGTCG ATGCGGGGGT GCTGAGGTTC GGGGAGTTCA AGACCAAGGC CGGGCGGCTG
TCGCCCTATT TCTTCAATGC CGGCCTGTTC GACGACGGCG CCAAGCTGGG CCGTCTGGCG
CAATTCTATG CACGCCGGCT GGTGGCTTCG GGGCTGCAGT TCGACATGCT GTTCGGCCCC
GCCTACAAGG GCATCACGCT GGCCGCGGCG GTGGCCATCG AGCTGGCGCG GCTCGGCCAC
AACGTGCCTT ACGCCTACAA CCGCAAGGAA GCCAAGGACC ACGGCGAGGG TGGCACGCTG
GTCGGCGCGC CGGTGCGCGG GCGGGTGCTG ATCATCGACG ACGTGATCTC CGCGGGCACT
TCGGTGCGCG AGTCGATCGC GATGATCCGC GCCGCCGGCG CCGAGCCCTG CGGCGTGACG
ATCGCGCTCG ACCGCCAGGA GAAGGCCAGC GCCGAGGGTG TCGACGCGCC GCATTCGGCG
GTGCAGTTCG TGCAGCGCGA GCTCGGCCTG GCGGTGGTGG CGATCGCCAC GCTCGACGAC
CTGCTGCAGT TCCTGTCGGT GCAGAGCAAT GCCGTGCTGG CCAGCCACCT GCCCGCGGTG
CAGGCCTATC GCGGCCGCTA CGGAGTGGCG CAGTGA
|
|---|
| Protein sequence | MNDDPLAQST TDNLAQDFVS FAVDAGVLRF GEFKTKAGRL SPYFFNAGLF DDGAKLGRLA
QFYARRLVAS GLQFDMLFGP AYKGITLAAA VAIELARLGH NVPYAYNRKE AKDHGEGGTL
VGAPVRGRVL IIDDVISAGT SVRESIAMIR AAGAEPCGVT IALDRQEKAS AEGVDAPHSA
VQFVQRELGL AVVAIATLDD LLQFLSVQSN AVLASHLPAV QAYRGRYGVA Q
|
|---|
| |