| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4026 |
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| Symbol | |
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| ID | 6161696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4508571 |
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| End bp | 4510430 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666806 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001793045 |
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| Protein GI | 171060696 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000236263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCCGCG CCCACTCCGT CGAACCCGCC CCCCAGTCGC CGCCCGGCAC CCCGCGCAGC
GACTGGTTCA CCATCCGGCG CCTGGCGCCC TACCTGTGGC GCTACCGCTG GCGGGTCGGT
TTTGCGCTGA CTTTCCTGGT CGCCGCCAAG CTGGCCAACG TCGGCGTGCC GGTGCTGCTC
AAGCAGCTGG TCGACGGGCT GGCGATTCCC GCCGGCGATC CGCGCGCGCT GCTGGTCGTG
CCGGTCGGCC TGCTGGTGGC CTACGCCGGC CTGCGGCTGA TGACGACGGT GTTCACCGAA
CTGCGCGAGC TGGTGTTCGC CAAGGCCACG CACGGCGCGG CACGGCAGAT CGCGCTGGAG
ACCTTCCGCC ACCTGCACGC CCTGAGCCTG CGTTTCCACC TCGAGCGCCA GACCGGCGGC
ATGACACGCG ACATCGAGCG TGGCACGCGC GCGCTGCAGT CGCTGGTGAG CTATTCGCTG
TTCACGATCG TGCCCACGCT GGTCGAGCTG GTGCTGGTGC TGGTGTTGCT GGGCAGCCAG
TTCGACATGG GTTTCGTCTG GATCACGCTG GCCGCGCTGG TGGCCTACGC GGTCTTCACG
ATCACCGTCA CCGAGTGGCG CACGCAGTAC CGCCGGCACA TGAACGAGCT CGATTCGAAG
GCGCACAGCC GGGCGATCGA CGCGCTGCTG AACTACGAGA CGGTCAAGTA CTTCAACAAC
GAGGACTTCG AGGCCCGGCG CTACGACGAG GGGCTCGACG CCTTCCGGCG CGCGCAGCTC
AAGTCGCAGG GCACGCTGTC GCTGCTCAAC ACCGGCCAGC AGTTCATCAT CGCCGCCAGC
CTGGTGGCGA TGCTCTGGCG CGCCACCGAC GGCGTGGTCG AGCAGCGCCT GACGCTGGGC
GACTTCGTGA TGGTCAACGC GCTGCTGATC CAGCTCTACA TCCCGCTGAA CTTCCTGGGC
GTGCTGTACC GCGAGGTCAA GCAGAGCCTG ACCGACCTCG ACAAGATGTT CAACCTGCTC
GAGCGCGAAC GCGAGGTCGC CGACGCGCCC GATGCCCATG TGCTGCAGGT GGCCGACGCC
ACGGTGCGCT TCGAGCACGT CGACTTCAGC TACGACCCGC GCCGGCAGAT CCTGCATGAC
GTCAGCTTCG AGATCCCGGC CGGCAGGACG GTGGCGGTGG TGGGCGCGTC GGGTTCGGGC
AAGAGCACGC TGGCGCGGCT GCTGTACCGT TTCTACGACG TGGGCGGCGG GGGCATCTCG
GTCGACGGCC AGGACCTGCG GACGCTGACG CAGGACAGCC TGCGCCGCGC CATCGGCATC
GTGCCGCAGG ACACCGTGCT GTTCAACGAC AGCATCGGCT ACAACATCGG CTACGGCCGC
GCCGGCGCCA GCCAGGCCGA GATCGAGGCG GCGGCGCGCG CGGCGCACAT CCACGACTTC
ATCGTGGCGC AGCCGCAGGG TTACGACACG GTGGTCGGCG AGCGCGGTCT GAAGCTCTCG
GGTGGCGAGA AACAGCGCGT GGCGATCGCC CGCACGCTGC TGAAGAACCC GCCGATCCTG
ATCTTCGACG AGGCCACCTC GGCGCTCGAT TCGGCCAACG AACGCGCCAT CCAGGCCGAG
CTGTCGAGCG CGGCGCGTGG CAAGACCGCG CTGGTGATCG CGCACCGGCT CAGCACGGTG
GTCGATGCGC ACCAGATCGT CGTGCTCGAT CACGGCCGGG TGATCGAGCG TGGCACCCAC
CTGCAACTGC TGGCGCTGCA GGGTGCCTAC GCGCGCATGT GGCGGCTGCA GCAGAGCAGC
CAGTCCAGGG CGGCGTCGCA GGACGGGGCC GAGGGAGAGC CCGTAGCAGC GGCGCTCTGA
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| Protein sequence | MRRAHSVEPA PQSPPGTPRS DWFTIRRLAP YLWRYRWRVG FALTFLVAAK LANVGVPVLL
KQLVDGLAIP AGDPRALLVV PVGLLVAYAG LRLMTTVFTE LRELVFAKAT HGAARQIALE
TFRHLHALSL RFHLERQTGG MTRDIERGTR ALQSLVSYSL FTIVPTLVEL VLVLVLLGSQ
FDMGFVWITL AALVAYAVFT ITVTEWRTQY RRHMNELDSK AHSRAIDALL NYETVKYFNN
EDFEARRYDE GLDAFRRAQL KSQGTLSLLN TGQQFIIAAS LVAMLWRATD GVVEQRLTLG
DFVMVNALLI QLYIPLNFLG VLYREVKQSL TDLDKMFNLL EREREVADAP DAHVLQVADA
TVRFEHVDFS YDPRRQILHD VSFEIPAGRT VAVVGASGSG KSTLARLLYR FYDVGGGGIS
VDGQDLRTLT QDSLRRAIGI VPQDTVLFND SIGYNIGYGR AGASQAEIEA AARAAHIHDF
IVAQPQGYDT VVGERGLKLS GGEKQRVAIA RTLLKNPPIL IFDEATSALD SANERAIQAE
LSSAARGKTA LVIAHRLSTV VDAHQIVVLD HGRVIERGTH LQLLALQGAY ARMWRLQQSS
QSRAASQDGA EGEPVAAAL
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