Gene Lcho_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4018 
Symbol 
ID6163046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4501347 
End bp4502222 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content68% 
IMG OID641666798 
Productheat shock protein HtpX 
Protein accessionYP_001793037 
Protein GI171060688 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000275488 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGCA TCGCGCTGTT CCTGATCACC AACCTGGCCG TGATGGCCGT GCTGGGCATC 
ACCGCCAGCC TGCTGGGCTT CAACCGCTAC TACGCCGCCA CCGGGCTTGA TCTGGGCGCC
TTGCTCGGTT TCGCGATGGT GATGGGCTTC GGCGGCGCCT TCATCTCGCT GCTGATGAGC
AAGCCGATGG CCAAGTGGAG CACCGGTGCG GTCGTCATCA ACGACTCGCC CGAGCCGATG
CACCGCTGGC TGGTCGACAC GGTGGCGCGC TTCTCCAAGC GTGCCGGGAT CGAGATGCCC
GAGGTCGCGC TCTACGAGGG CGAGCCCAAC GCCTTTGCCA CCGGCGCGTT CAAGAACTCG
GCGCTGGTCG CGGTGTCGAC CGGTCTGCTG CAGAGCATGA GCCGCGACGA GGTCGAGGCG
GTGATCGGCC ACGAGGTGGC GCACGTCGCC AACGGCGACA TGGTGACGAT GACGCTGATC
CAGGGCGTGA TGAACACCTT CGTGGTGTTC CTGTCGCGTG CGATCGGCTA CTTCATCGAC
CGGGTGGTGC TCAAGAACGA CCGTGAAGGC CCCGGCATCG GCTACATGGT GACCACCGTG
GTGCTCGACC TGCTGCTCGG CCTGGTCGCC GCGATGATCG TGGCCTGGTT CTCGCGCCAG
CGCGAGTTCC GCGCCGACGC CGGTGCGGCC CAGCTGATGG GCAGCCGCGT GCCGATGCAG
CGCGCGCTGG CGCGCCTGGG CGGCATCGAC CCCGGCGAGC TGCCGCAGAG CGTGGCGACG
ATGGGCATCA ACGGCCGGCC CAGCGGCATC ATGGCGCTGT TCTCCAGCCA CCCGCCGATC
GAGGACCGCA TCCGCGCGCT GCAGCAATCT GCCTGA
 
Protein sequence
MKRIALFLIT NLAVMAVLGI TASLLGFNRY YAATGLDLGA LLGFAMVMGF GGAFISLLMS 
KPMAKWSTGA VVINDSPEPM HRWLVDTVAR FSKRAGIEMP EVALYEGEPN AFATGAFKNS
ALVAVSTGLL QSMSRDEVEA VIGHEVAHVA NGDMVTMTLI QGVMNTFVVF LSRAIGYFID
RVVLKNDREG PGIGYMVTTV VLDLLLGLVA AMIVAWFSRQ REFRADAGAA QLMGSRVPMQ
RALARLGGID PGELPQSVAT MGINGRPSGI MALFSSHPPI EDRIRALQQS A