Gene Lcho_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_4016 
Symbol 
ID6163427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4499072 
End bp4499902 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID641666796 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_001793035 
Protein GI171060686 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value7.34924e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATCC GATCGGCCTC GCGGCGAGCC GCGGGCGCGC TGCACGCACC GCCGCCCGCC 
CGCGCCGACA AGGACGGCTC GCGCCTGCGC GTGGCCACCT ACAACATCCA CAAGGGCGTG
CGCGGCATGG GGCCGCAGAA GCGGCTCGAG ATCCACAACC TCGGCATGGG CGTGCAGGCG
CTCGACGCCG ACCTGGTCTG CCTGCAGGAA GTGCGGCTGT TCCATCACGG CGACGCCAAC
CGCTTCGACC ACACCCATTT CGGCTGGCCG AAGCAGGGCC AGGCCGAGTT CCTGGCGCCC
GAAGGCTACG AGAGTGCCTA CCGCACCAAC GCCGTCACGC GCGGCGGCGA ACACGGCAAC
GCGCTGCTGT CGCGCTGGCC GCTGGGTGAT GTCGGCCACC ACGACGTCTC CGACCACCGC
TTCGAGCAGC GCGGCCTGCT GCACACGATG GTGCAGTGGC ACGGCGTGAC GGTGCACACC
ATCGTGGCCC ATTTCGGGCT GATCCACGCC AGCCGGGTGC GCCAGGCCGA GCGGCTGGGC
GACTACATCG ACGCGAAGAT CCCGCGTGGC GCGCTGGTGG TGGTGGCGGG CGACTTCAAC
GACTGGGGCG AGCGGCTGGA CCCGATCATC GGCGCCGCCG GCCTGCAGCG CGCGGCGCCA
CCGGACGCGC GGCGCGGGCC GCTGACCTTC CCGTCGCGCA TGCCGCTGTT CGCGCTCGAC
CGGGTCTACA CCCGCGGCCT GCGCTGCGCC GACACCTTCG TGCCACGCGG GGCCGCCTGG
GCCCGCATGT CCGACCATCT GCCGCTGGTG GTGGAGCTGG AGCGGGTGTG A
 
Protein sequence
MNIRSASRRA AGALHAPPPA RADKDGSRLR VATYNIHKGV RGMGPQKRLE IHNLGMGVQA 
LDADLVCLQE VRLFHHGDAN RFDHTHFGWP KQGQAEFLAP EGYESAYRTN AVTRGGEHGN
ALLSRWPLGD VGHHDVSDHR FEQRGLLHTM VQWHGVTVHT IVAHFGLIHA SRVRQAERLG
DYIDAKIPRG ALVVVAGDFN DWGERLDPII GAAGLQRAAP PDARRGPLTF PSRMPLFALD
RVYTRGLRCA DTFVPRGAAW ARMSDHLPLV VELERV