| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4016 |
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| Symbol | |
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| ID | 6163427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4499072 |
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| End bp | 4499902 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666796 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001793035 |
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| Protein GI | 171060686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000734924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACATCC GATCGGCCTC GCGGCGAGCC GCGGGCGCGC TGCACGCACC GCCGCCCGCC
CGCGCCGACA AGGACGGCTC GCGCCTGCGC GTGGCCACCT ACAACATCCA CAAGGGCGTG
CGCGGCATGG GGCCGCAGAA GCGGCTCGAG ATCCACAACC TCGGCATGGG CGTGCAGGCG
CTCGACGCCG ACCTGGTCTG CCTGCAGGAA GTGCGGCTGT TCCATCACGG CGACGCCAAC
CGCTTCGACC ACACCCATTT CGGCTGGCCG AAGCAGGGCC AGGCCGAGTT CCTGGCGCCC
GAAGGCTACG AGAGTGCCTA CCGCACCAAC GCCGTCACGC GCGGCGGCGA ACACGGCAAC
GCGCTGCTGT CGCGCTGGCC GCTGGGTGAT GTCGGCCACC ACGACGTCTC CGACCACCGC
TTCGAGCAGC GCGGCCTGCT GCACACGATG GTGCAGTGGC ACGGCGTGAC GGTGCACACC
ATCGTGGCCC ATTTCGGGCT GATCCACGCC AGCCGGGTGC GCCAGGCCGA GCGGCTGGGC
GACTACATCG ACGCGAAGAT CCCGCGTGGC GCGCTGGTGG TGGTGGCGGG CGACTTCAAC
GACTGGGGCG AGCGGCTGGA CCCGATCATC GGCGCCGCCG GCCTGCAGCG CGCGGCGCCA
CCGGACGCGC GGCGCGGGCC GCTGACCTTC CCGTCGCGCA TGCCGCTGTT CGCGCTCGAC
CGGGTCTACA CCCGCGGCCT GCGCTGCGCC GACACCTTCG TGCCACGCGG GGCCGCCTGG
GCCCGCATGT CCGACCATCT GCCGCTGGTG GTGGAGCTGG AGCGGGTGTG A
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| Protein sequence | MNIRSASRRA AGALHAPPPA RADKDGSRLR VATYNIHKGV RGMGPQKRLE IHNLGMGVQA
LDADLVCLQE VRLFHHGDAN RFDHTHFGWP KQGQAEFLAP EGYESAYRTN AVTRGGEHGN
ALLSRWPLGD VGHHDVSDHR FEQRGLLHTM VQWHGVTVHT IVAHFGLIHA SRVRQAERLG
DYIDAKIPRG ALVVVAGDFN DWGERLDPII GAAGLQRAAP PDARRGPLTF PSRMPLFALD
RVYTRGLRCA DTFVPRGAAW ARMSDHLPLV VELERV
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