Gene Lcho_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3997 
SymbolrplW 
ID6160826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4479993 
End bp4480319 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content60% 
IMG OID641666775 
Product50S ribosomal protein L23 
Protein accessionYP_001793016 
Protein GI171060667 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000137329 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCGCG CACCCATCAG TCGCACGTTT ACAGAAGGCC GCCTGGCCCA GGTTCTGGTC 
GCACCGATCA TTTCCGAGAA GGCCACCAGC ATCGGCGAAA AGCACAATCA AGTGCTGTTC
AAGGTGCTGC AGGACGCCAC CAAGATCGAG ATCAAGGCCG CCGTTGAACT GATGTTCAAG
GTCGAGGTCG AGTCGGTCCA GGTGCTCAAC CAGAAGGGCA AGACCAAGCG CTTCGGCGGC
CGTACCGGCC GTCGTGACCA CCTGCGCAAG GCCTATGTCT CTCTGAAGGC GGGTCAGGAA
CTCAACTTCT CCGGGGAGGC CGCGTAA
 
Protein sequence
MSRAPISRTF TEGRLAQVLV APIISEKATS IGEKHNQVLF KVLQDATKIE IKAAVELMFK 
VEVESVQVLN QKGKTKRFGG RTGRRDHLRK AYVSLKAGQE LNFSGEAA