Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3997 |
Symbol | rplW |
ID | 6160826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4479993 |
End bp | 4480319 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641666775 |
Product | 50S ribosomal protein L23 |
Protein accession | YP_001793016 |
Protein GI | 171060667 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0089] Ribosomal protein L23 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000137329 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCGCG CACCCATCAG TCGCACGTTT ACAGAAGGCC GCCTGGCCCA GGTTCTGGTC GCACCGATCA TTTCCGAGAA GGCCACCAGC ATCGGCGAAA AGCACAATCA AGTGCTGTTC AAGGTGCTGC AGGACGCCAC CAAGATCGAG ATCAAGGCCG CCGTTGAACT GATGTTCAAG GTCGAGGTCG AGTCGGTCCA GGTGCTCAAC CAGAAGGGCA AGACCAAGCG CTTCGGCGGC CGTACCGGCC GTCGTGACCA CCTGCGCAAG GCCTATGTCT CTCTGAAGGC GGGTCAGGAA CTCAACTTCT CCGGGGAGGC CGCGTAA
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Protein sequence | MSRAPISRTF TEGRLAQVLV APIISEKATS IGEKHNQVLF KVLQDATKIE IKAAVELMFK VEVESVQVLN QKGKTKRFGG RTGRRDHLRK AYVSLKAGQE LNFSGEAA
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