| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3995 |
|---|
| Symbol | rpsS |
|---|
| ID | 6160824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4478875 |
|---|
| End bp | 4479150 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641666773 |
|---|
| Product | 30S ribosomal protein S19 |
|---|
| Protein accession | YP_001793014 |
|---|
| Protein GI | 171060665 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0185] Ribosomal protein S19 |
|---|
| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00000322685 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTT CACTCAAGAA GGGTCCTTTC GTCGACCATC ACCTGCTCGC CAAAGTCGAG
AAGGCGGTTG CCATCAAGGA CAAGAAGCCG GTCAAGACCT GGTCGCGTCG CTCGACCATC
CTGCCCGAGT TCATCGGCGT GACGATTGCC GTGCACAACG GCAAGCAGCA CGTGCCTGTG
TACGTGACCG ACCAGATGGT CGGCCACAAG CTGGGCGAGT TCGCGCTGAC CCGTACGTTC
AAGGGTCACC CCGCGGACAA GAAAGCCAAG CGCTAA
|
|---|
| Protein sequence | MSRSLKKGPF VDHHLLAKVE KAVAIKDKKP VKTWSRRSTI LPEFIGVTIA VHNGKQHVPV
YVTDQMVGHK LGEFALTRTF KGHPADKKAK R
|
|---|
| |