| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3992 |
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| Symbol | rplP |
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| ID | 6159697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4477237 |
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| End bp | 4477653 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666770 |
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| Product | 50S ribosomal protein L16 |
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| Protein accession | YP_001793011 |
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| Protein GI | 171060662 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0197] Ribosomal protein L16/L10E |
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| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000729687 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTTGCAAC CGTCGCGTCG CAAGTTCCGT AAGGAACAAA AGGGCCGCAA CACGGGTGTC
GCCACCCGCG GTGCCAATGT CTCTTTCGGC GAGTTCGGCC TGAAGGCCAC CGAGCGTGGT
CGTCTGACTG CTCGCCAGAT CGAAGCAGCC CGTCGTGCCA TCTCGCGCCA TATCAAGCGC
GGTGGCCGTA TCTTCATCCG CATCTTTCCG GACAAGCCGA TTTCGCAGAA GCCTGCTGAA
GTCCGGATGG GTAACGGCAA GGGCAATCCG GAGTACTACG TCGCCGAGAT CCAGCCCGGC
AAGGTGCTCT ACGAACTGAA CGGCGTGCCT GAAGACCTCG CTCGCGAAGC GTTCACGCTG
GCAGCTGCCA AGCTGCCGCT GCGCACGACC TTCGTCACGC GCATGTTCGG CACCTGA
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| Protein sequence | MLQPSRRKFR KEQKGRNTGV ATRGANVSFG EFGLKATERG RLTARQIEAA RRAISRHIKR
GGRIFIRIFP DKPISQKPAE VRMGNGKGNP EYYVAEIQPG KVLYELNGVP EDLAREAFTL
AAAKLPLRTT FVTRMFGT
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