Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3935 |
Symbol | |
ID | 6163729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4414727 |
End bp | 4415122 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641666713 |
Product | ribosomal protein S8 |
Protein accession | YP_001792954 |
Protein GI | 171060605 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0096] Ribosomal protein S8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA GTGATCCTAT CGCCGACATG CTGACCCGCA TTCGCAACGC CCAGATGGTC GAAAAGACCA GCGTTGCGAT GCCGTCCTCC AAGCTGAAAT CTGCGATCGC GCAGGTGCTG AAGGACGAGG GTTACATCGA CGGCTTTGCG GTCAAGACGA CCGACGGCAA GTCGCAACTC GAGATTTCGC TGAAGTACTA CGCCGGGCGT CCGGTGATCG AGCGTATCGA GCGGGTGAGC CGTCCAGGTC TTCGGATCTA CAAGGGCCGC CACGATATCC CGACCGTGAT GAACGGTCTG GGTGTGGCCA TCGTCACCAC CCCCCAGGGC GTGATGACCG ATCGCAAAGC GCGCGCTGCC GGAATCGGTG GCGAGGTGCT GTGCTACGTC GCTTAA
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Protein sequence | MSMSDPIADM LTRIRNAQMV EKTSVAMPSS KLKSAIAQVL KDEGYIDGFA VKTTDGKSQL EISLKYYAGR PVIERIERVS RPGLRIYKGR HDIPTVMNGL GVAIVTTPQG VMTDRKARAA GIGGEVLCYV A
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