Gene Lcho_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3935 
Symbol 
ID6163729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4414727 
End bp4415122 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content61% 
IMG OID641666713 
Productribosomal protein S8 
Protein accessionYP_001792954 
Protein GI171060605 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGA GTGATCCTAT CGCCGACATG CTGACCCGCA TTCGCAACGC CCAGATGGTC 
GAAAAGACCA GCGTTGCGAT GCCGTCCTCC AAGCTGAAAT CTGCGATCGC GCAGGTGCTG
AAGGACGAGG GTTACATCGA CGGCTTTGCG GTCAAGACGA CCGACGGCAA GTCGCAACTC
GAGATTTCGC TGAAGTACTA CGCCGGGCGT CCGGTGATCG AGCGTATCGA GCGGGTGAGC
CGTCCAGGTC TTCGGATCTA CAAGGGCCGC CACGATATCC CGACCGTGAT GAACGGTCTG
GGTGTGGCCA TCGTCACCAC CCCCCAGGGC GTGATGACCG ATCGCAAAGC GCGCGCTGCC
GGAATCGGTG GCGAGGTGCT GTGCTACGTC GCTTAA
 
Protein sequence
MSMSDPIADM LTRIRNAQMV EKTSVAMPSS KLKSAIAQVL KDEGYIDGFA VKTTDGKSQL 
EISLKYYAGR PVIERIERVS RPGLRIYKGR HDIPTVMNGL GVAIVTTPQG VMTDRKARAA
GIGGEVLCYV A