| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3933 |
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| Symbol | rplR |
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| ID | 6163727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4413800 |
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| End bp | 4414165 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666711 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001792952 |
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| Protein GI | 171060603 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAACA AGAAAGAACA GCGCCTGCGT CGCTCCCGTC AGACGCGTGC TCGGATTGCC
CTTCAGGGCG TCGAGCGCCT GACCGTCTTC CGCACCAATC TGCATATCTA CGCCAGCGTC
ATCTCTGCCG ACGGCGGCAA GGTGCTGGCT TCGGCTTCGA CGGCCGAAAA AGAAGTGCGT
GCCCAGTTGG GCGTGGCCGG CAAGGGTGCT TGCGTGGACG CGGCCCAGTT GATTGGCAAG
CGTATCGCCG AGCGGGCAAA AGCCGCTGGA GTCGAGAAGG TTGCTTTCGA CCGGTCCGGA
TTCGCCTATC ACGGTCGAGT GAAAGCCCTG GCTGAAGCTG CCCGCGAAGC CGGTCTGCAG
TTCTAA
|
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| Protein sequence | MLNKKEQRLR RSRQTRARIA LQGVERLTVF RTNLHIYASV ISADGGKVLA SASTAEKEVR
AQLGVAGKGA CVDAAQLIGK RIAERAKAAG VEKVAFDRSG FAYHGRVKAL AEAAREAGLQ
F
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