| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3930 |
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| Symbol | rplO |
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| ID | 6161668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4412593 |
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| End bp | 4413027 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666708 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_001792949 |
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| Protein GI | 171060600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTCA ATTCGATCAA GCCAGGCTCG GGATCCAAGC ACGCCAAGCG TCGCGTGGGT
CGTGGCATCG GCTCCGGCCT GGGCAAGACC GCAGGTCGTG GCCACAAGGG TCAGAAGTCT
CGTGCGGGTG GCTATCACAA GGTGGGCTTC GAAGGCGGTC AGATGCCGCT GCAGCGTCGC
CTGCCCAAGC GTGGCTTCAA ATCGCATCTG CTGAAGTTCA ATGCAGAGAT CACGCTCGGC
CAACTGCAGG TTCTGGCTGT CGATGAGGTC GACCTGCTTC TCCTGAAGCA GATCGGTCTG
GTTGGTGAAC TGGCCAAGGT CGTGAAGGTG GTGAAGTCCG GCGAACTGAC GCGTGCTGTT
GTCCTCAAGG GCATCGGCGC GACTGCAGGC GCCAAGGCTG CGATTGAAGC GGCCGGCGGC
TCGCTGGCAG CCTGA
|
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| Protein sequence | MELNSIKPGS GSKHAKRRVG RGIGSGLGKT AGRGHKGQKS RAGGYHKVGF EGGQMPLQRR
LPKRGFKSHL LKFNAEITLG QLQVLAVDEV DLLLLKQIGL VGELAKVVKV VKSGELTRAV
VLKGIGATAG AKAAIEAAGG SLAA
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