| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3929 |
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| Symbol | secY |
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| ID | 6161667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4411256 |
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| End bp | 4412566 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641666707 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001792948 |
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| Protein GI | 171060599 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACCA ACGCAACTCA ACTGGCCAAG AGCGGCAAGT TTGGCGACCT GCGGCGCAGG
CTGACATTCT TGCTGCTGGC TCTGGTGGTC TATCGGGTCG GGGCTCATAT CCCTGTCCCG
GGGATCAACC CTGACCAGCT CGCGGAGCTG TTCAAGGGTC AGCAGGGCGG CATCCTGAAC
CTGTTCAACA TGTTCTCGGG TGGTGCGCTG TCTCGCTTCA CGGTGTTTGC GTTGGGGATC
ATGCCGTACA TCTCGGCATC GATCATCATG CAGTTGATGA CCCATGTGCT GCCGGCTCTC
GAGTCCTTGA AGAAGGAAGG CGAAGCAGGG CGGCGCAAGA TCACGCAGTA CACGCGTTAC
GGCACGCTTG GTCTGGCGAT CTTCCAGTCT TTGGGAATCG CACTGGCGAT CGAAGGTTCT
CCTGGTCTGG TGATCGATCC GGGCCCGATG TTCCGCATCG GCGCGATGGT CAGCTTGACT
GCGGGAACCA TGTTCCTGAT GTGGCTGGGT GAGCAGATCA CCGAGCGTGG ACTCGGCAAC
GGTATCTCGA TCCTGATCTT TGGCGGCATT GCTGCTGGCT TGCCCAGTGC GATCGGTGGG
TTGCTGAACC TGGTCAATAC CGGTTCGATG AGCATCATCG CGGCACTGTT CATCGTTGCC
ATCGTGATCG GCGTGACTTT CGTGGTCGTG TTCGTCGAGC GCGGTCAACG CAAGATCCTG
GTCAACTACG CCAAGCGTCA GGTCGGCAAC AAGGTCTATG GCGGGCAGTC GTCGCACTTG
CCGCTGAAGA TCAACATGTC GGGTGTGATT CCGCCGATCT TTGCCTCGTC GATCATCCTG
CTGCCTGCGA CGGTTGTTGG TTGGTTTGCC ACAGGTGAGA GCCTGGTCTG GTTGAAGGAC
ATTTCTGCGG CCTTGTCGCC GGGTCAGCCG ATCTATGTCC TGCTGTATGC CGCGATGATC
GTCTTCTTCT GCTTCTTCTA CACCGCGTTG GTGTTCAACA GCAGAGAGAC CGCTGACAAT
CTGAAGAAGA GTGGCGCATT CATTCCTGGA ATTCGACCAG GCGACCAGAC TGCACGCCAC
ATCGACAAGA TTCTGGCGCG TCTGACGCTC GGTGGCGCGG TCTACATCAC TGCGGTGTGT
CTGCTGCCCG AATTCCTGGT CCTGAAGTAC AACGTGCCGT TCTATTTTGG TGGCACGTCC
TTGCTGATCA TCGTTGTGGT CACGATGGAC TTCTGGGCCC AGGTCCAGTC CTACGTGATG
TCGCAGCAGT ACGAGTCGTT GCTCAAGAAG GCCAGTTTCA AGGCAGGCTG A
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| Protein sequence | MATNATQLAK SGKFGDLRRR LTFLLLALVV YRVGAHIPVP GINPDQLAEL FKGQQGGILN
LFNMFSGGAL SRFTVFALGI MPYISASIIM QLMTHVLPAL ESLKKEGEAG RRKITQYTRY
GTLGLAIFQS LGIALAIEGS PGLVIDPGPM FRIGAMVSLT AGTMFLMWLG EQITERGLGN
GISILIFGGI AAGLPSAIGG LLNLVNTGSM SIIAALFIVA IVIGVTFVVV FVERGQRKIL
VNYAKRQVGN KVYGGQSSHL PLKINMSGVI PPIFASSIIL LPATVVGWFA TGESLVWLKD
ISAALSPGQP IYVLLYAAMI VFFCFFYTAL VFNSRETADN LKKSGAFIPG IRPGDQTARH
IDKILARLTL GGAVYITAVC LLPEFLVLKY NVPFYFGGTS LLIIVVVTMD FWAQVQSYVM
SQQYESLLKK ASFKAG
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