Gene Lcho_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3919 
Symbol 
ID6161716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4405362 
End bp4406357 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content74% 
IMG OID641666697 
Productthiamine-monophosphate kinase 
Protein accessionYP_001792938 
Protein GI171060589 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGG GTGAATTCGA CCTGATCGCC AAGTACTTCG ACCGCCCGGC GCGGCGCAAC 
CCGCTCGGCG TCGGCGACGA CTGCGCGCTG CTGGCGCCGG CGCCGGGCAT GCAGCTCGCG 
GTGTCGACCG ACATGCTGGT CGAAGGCCGG CACTTTCTCC CGACCGTCTC GGCCGAGGCG 
CTGGGCCACA AGGCGCTGGC GGTCAACCTG TCCGATCTGG CGGCCTGCGG CGCCGAGCCC 
TTGGCGTTCA TGCTGGCGCT GTCGATGCCG AAGGTCGACG AGGCCTGGCT GGCCGGCCTG 
GCGCGCGGCC TGTTCGCGCT GGCCGACGCG CATGAGATCG AACTGGTCGG CGGTGACACC 
ACCGCCGGCC CGCTCAACCT GTGCATCACC GTGATGGGCC AGGTGCCGGC CGGCACGGCC 
TTGCTGCGCA GCGGCGCACG GCCCGGCGAT CAGCTCTGGG TCAGCGGGCA GCTGGGCCTG 
GCGCGCCTGT GGCTCGAGGC GCTGCACGGC CCGGTCGCGC TCGACGGCAC CGATTTCACC 
GCCGCACGGC TGGCGATGGA GCTGCCGAAC CCGCGGCTCG CGCTGGGGCG GGCGCTGCGC 
GGCATCGCCA GCAGCGCGCT CGACCTGTCG GACGGGCTGC TGGGCGACCT CGGCCATGTG 
CTGCGGCGCT CGGGCGCGGC CTGCCATCGC GACCGGACAC CGCTCGGCGC CGAGATCGAG 
ATCGATCGCC TGCCACGCCA CGAAGCGCTG GCGCGTCAGC CCGAGCCGAT CCAGCAGCTG 
TGCATGCTCT GCGGCGGAGA CGACTACGAG CTGCTGTTCA CCGCCCCGCC CGGCGCCCAC 
GGCGCCGTGC TCGAAGCGGC CGCCGCGGCG CAGACCGCCG TGACCTGCGT CGGCCGCATC 
ACGCCGGAAC CCGGCACGCG CGTGATCGAC CGCAACGGCG CGCCGATCGC CACGCCCTGG 
GCCAGCTTCG ACCATTTCGC AGGCCCGACG CCATGA
 
Protein sequence
MSLGEFDLIA KYFDRPARRN PLGVGDDCAL LAPAPGMQLA VSTDMLVEGR HFLPTVSAEA 
LGHKALAVNL SDLAACGAEP LAFMLALSMP KVDEAWLAGL ARGLFALADA HEIELVGGDT 
TAGPLNLCIT VMGQVPAGTA LLRSGARPGD QLWVSGQLGL ARLWLEALHG PVALDGTDFT 
AARLAMELPN PRLALGRALR GIASSALDLS DGLLGDLGHV LRRSGAACHR DRTPLGAEIE 
IDRLPRHEAL ARQPEPIQQL CMLCGGDDYE LLFTAPPGAH GAVLEAAAAA QTAVTCVGRI 
TPEPGTRVID RNGAPIATPW ASFDHFAGPT P