| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3894 |
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| Symbol | |
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| ID | 6162053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4374212 |
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| End bp | 4375540 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666672 |
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| Product | histidine kinase |
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| Protein accession | YP_001792913 |
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| Protein GI | 171060564 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.927411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTCCCG CATCCTCTCT CGCGCCGGTC TGGCTCGACG GCGAAGCCGC CGGCGATGCC
CTCAGCCCCG GCCCGGGCAC CACGCTGCAG GGCCTGCGCA TGCTGGCGAT CCTGCGCACG
GTCGCGCCGA TCGCGCAGGC GCTGACCCTG GTGCTGGTCG CGCATCGCTA TCAGGTGCGG
GTGCCGGTGA ACGCGGTGAC GGCGCTGATC GCGCTCGAGG CGTTGGTGGC CGCTGCCACC
TGGTGGCGCC TGCGCCGGGC CGCCCCGGTG AGTCCGCGCG AGCTGTTCGC CCAGGTGCAC
GTCGACATCG TGCTGTTCGC GCTGCTGCTG TACCTGACGG GCGGGGCGTC GAACCCGTTT
GCACCGCTGT TCCTGCTGCC GATGGCGATC GCCACCTCGG CGATGTCGTC CAACCGGGTC
TGGCTGGTCA CGCTGTCGAC GATGGCCGCC TACGCCGCCC TGCGCTACTG GCATGTGCCG
CTGCATCACC CGGACGGACT GACCGAGGTG TATGCGCTGC ACGAGGACGG CATGGTGGTG
AACTACCTGT TCACCGCCGC GTTGGCGGCC TTTTTCGGCA CCCGCATGTG CGCGGCCACG
CGCCGCCACG ACCGCATGCT GGGCGATGCC CGCGACGCCC AGATGCGCAA CGAATCGGTG
GTGGCGATCG GCGCGCTGGC GGCCGGCTAC GCGCACGAAC TCAGCTCGCC GCTGGCGACG
ATGGCGGTGG TGGTCTCCGA GCTGAAACGC GAACACCGCG ACGACCCCGA CCTGCAGCAC
AACCTCGACG TCATCGAGCA GCAGATCGGC GCCAGCAAGC AGATCATTTC CAAGCTCGCC
AGCACCGCCG GCCAGCGCCG CGCCGAGACC GCCAGCGGGG CGCGGCTGGA CCAGTTCATC
GCGGCGATCG TCGAGCGGGC GCAGGCGCTG CATCCGGGCG CGTCGATCGG CCTGAAGCTC
GACACGGCGT CCGTGGCGCC GCAGGTGATC GTCGAAGAGA CCCTCAGGCA GGCGATCACC
AACCTGATCG ACAACGCGGT GCAGGCCTCG CCGCACTACG TCGTGGTGCG GGCGGACTGG
TCGCAAGGCG AACTGCTGGT CGAGGTCCGC GACCGCGGGC CCGGCTTCAG CACCGAGGCC
CTCGGCCGGC TGGGCAAGCA GGCCGGCACC ACCAAGGCCG AACACGGCGG GCTGGGCGTC
GGCCTGCTGC TGAGCGCCGC CACCCTCGAG CGCCTGCACG GGCGGCTCGA GTTCGCCAAC
GATCCTCAAG GCGGGGCCTG CGCGCGGGTG CGTGTGCCGC TGTCGTCGAT CCGGATCAAC
AAGCAGTGA
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| Protein sequence | MLPASSLAPV WLDGEAAGDA LSPGPGTTLQ GLRMLAILRT VAPIAQALTL VLVAHRYQVR
VPVNAVTALI ALEALVAAAT WWRLRRAAPV SPRELFAQVH VDIVLFALLL YLTGGASNPF
APLFLLPMAI ATSAMSSNRV WLVTLSTMAA YAALRYWHVP LHHPDGLTEV YALHEDGMVV
NYLFTAALAA FFGTRMCAAT RRHDRMLGDA RDAQMRNESV VAIGALAAGY AHELSSPLAT
MAVVVSELKR EHRDDPDLQH NLDVIEQQIG ASKQIISKLA STAGQRRAET ASGARLDQFI
AAIVERAQAL HPGASIGLKL DTASVAPQVI VEETLRQAIT NLIDNAVQAS PHYVVVRADW
SQGELLVEVR DRGPGFSTEA LGRLGKQAGT TKAEHGGLGV GLLLSAATLE RLHGRLEFAN
DPQGGACARV RVPLSSIRIN KQ
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