| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3891 |
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| Symbol | |
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| ID | 6162050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4364835 |
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| End bp | 4365503 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666669 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001792910 |
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| Protein GI | 171060561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGG AGATGACGAG GCCCACAAGC CGTGCGATGC GCTGGCTGGC CGTTTGGCTG
GTGCTGGCGG GCGGCCTGAG CCTGGTGCCG ATGGCCGCGG CGCACGATCA CCACGATCAC
CCCGCCTCGC ACGGCCAGAC CGGCACGCCG CCCGTGGTGC CGCAGGGCGC GCGCATCACG
CTGGCCGACG TGGCGCTGCT CGACCAGGAC GGCCGCAGCC TGCGCCTGCG CAGCGACGCG
ATCGGCGAGC GCATCGTGAT CGTCAACTTC GCGTACACCA CCTGCACCAC GGTCTGCCCG
GTGGCCTCGG CGGTGCTGGC GCAGGTGCAG GGCCGGCTGG GCGCGCGGCT GGGGCGCGAC
GTCGGCCTGA TCACCGTCAG CGTCGACCCG CTGCGCGACA CGCCGGCACG CCTGAAGGCC
TACGCCGAGC GCGTCGGCGC CGGCCCGGGC TGGCGCTGGC TCACCGGTGC CAAGCCGCAG
GTCGACGAGG TGCTGAAAGC CTTCGGCGCC TACACCGCCA ACTTCGCCGA TCACCCGCCG
CTGACGCTGG TGGGTGATGC CAGGAGCGGC CGGTGGCTGC GCTTCTACGG CTTCCCGACG
CCCGAGCAGC TGGTGACGGC GGTCGAGCAG TTGAGCAGCG CGCGCGACAA GGCGGGCCGC
TCGGGTTGA
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| Protein sequence | MKPEMTRPTS RAMRWLAVWL VLAGGLSLVP MAAAHDHHDH PASHGQTGTP PVVPQGARIT
LADVALLDQD GRSLRLRSDA IGERIVIVNF AYTTCTTVCP VASAVLAQVQ GRLGARLGRD
VGLITVSVDP LRDTPARLKA YAERVGAGPG WRWLTGAKPQ VDEVLKAFGA YTANFADHPP
LTLVGDARSG RWLRFYGFPT PEQLVTAVEQ LSSARDKAGR SG
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