| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3873 |
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| Symbol | secE |
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| ID | 6162493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4346156 |
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| End bp | 4346539 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641666647 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_001792892 |
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| Protein GI | 171060543 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACCC AAGAAGTCGA AACCGTCTCC ACCAGTGCCG ACAAGGCCAA GCTGGCTGCT
GCCGTGCTGC TGGTCGTGGG TGCACTGGTG GCGTATTACG CGTTGTCCAA GCAGGGTGTC
TATGCGCAGT GGGGGGCGTT GCTGGTTCTC CTGGCGGCTG CAGTCGGCGC ATTCCTGACG
GCGGAGCAGG GCAAGGCGCT GGTCGCCTAC GGTCGTGAGT CGGTGCGCGA AATGCGCAAG
GTCGTGTGGC CGACTCGCAA GGAAGCCACG CAGATGACTG GCTACGTGTT TGCCTTCGTT
GTCGTGATGG CTTTGTTCCT TTGGCTGACG GACAAGACCC TCGAGTGGGT GTTCTACGAC
CTGATCCTCG GTTGGAAGCG TTGA
|
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| Protein sequence | MSTQEVETVS TSADKAKLAA AVLLVVGALV AYYALSKQGV YAQWGALLVL LAAAVGAFLT
AEQGKALVAY GRESVREMRK VVWPTRKEAT QMTGYVFAFV VVMALFLWLT DKTLEWVFYD
LILGWKR
|
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