| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3865 |
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| Symbol | rpsJ |
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| ID | 6161527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4333495 |
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| End bp | 4333806 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641666638 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001792884 |
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| Protein GI | 171060535 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGC AAAAGATCCG CATCCGTCTG AAGGCCTTCG ATTACAAGCT GATCGACCAG
TCGGCTCAGG AAATCGTCGA GACCGCCAAG CGCACGGGTG CGATCGTCAA GGGCCCCGTG
CCCCTGCCGA CCCGCATGCA GCGTTTCGAC ATCCTGCGTT CGCCGCACGT CAACAAGACC
AGCCGCGACC AGTTTGAAAT GCGCACCCAC CAGCGCCTGA TGGACATCGT CGATCCGACC
GACAAGACGG TTGACGCCCT GATGAAGCTC GACCTGCCCG CAGGCGTGGA CGTCGAAATC
AAGCTGCAAT AA
|
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| Protein sequence | MQKQKIRIRL KAFDYKLIDQ SAQEIVETAK RTGAIVKGPV PLPTRMQRFD ILRSPHVNKT
SRDQFEMRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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