| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3864 |
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| Symbol | |
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| ID | 6161177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4332224 |
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| End bp | 4333414 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666637 |
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| Product | elongation factor Tu |
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| Protein accession | YP_001792883 |
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| Protein GI | 171060534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGG AAAAGTTTGA GCGGACCAAG CCGCACGTCA ACGTCGGCAC GATCGGTCAC
GTGGACCACG GCAAGACGAC GCTGACGGCG GCGATCACGA CCGTGCTGGC AGCCAAGTTC
GGCGGCTCGG CCAAGGCGTA CGACCAGATC GACGCAGCGC CCGAAGAGAA GGCACGCGGC
ATCACCATCA ACACCGCGCA CGTCGAGTAC GAAACGGCCA ACCGCCATTA CGCACACGTC
GACTGCCCGG GTCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCCGC CCAGATGGAC
GGCGCGATCC TGGTGTGCTC GGCCGCCGAC GGCCCGATGC CCCAGACCCG CGAGCACATC
CTGCTGGCGC GTCAGGTCGG TGTGCCGTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTCGACGACG CCGAGCTGCT CGAGCTGGTC GAAATGGAAG TGCGCGAGCT GCTCGACAAG
TACGAGTTCC CGGGTGACGA CACCCCGATC GTGCACGGCA GCGCCAAGCT CGCCCTCGAA
GGCGACAAGG GCCCGCTGGG CGAGCAGGCC ATCATGAAGC TGGCCGATGC GCTCGACAGC
TACATCCCCA CGCCCGAGCG CGCGGTCGAC GGCGCCTTCC TGATGCCGGT CGAAGACGTG
TTCTCGATCT CGGGTCGCGG CACCGTGGTG ACCGGCCGTA TCGAGCGCGG CATCATCAAG
GTCGGCGAAG CCATCGAGAT CGTCGGCATC AGCGCCACGC AGAACACCAC CTGCACCGGC
GTCGAGATGT TCCGCAAGCT GCTCGACCAA GGTCAGGCGG GCGACAACGT CGGCATCCTG
CTGCGCGGCA CCAAGCGCGA AGACGTGCAG CGCGGCCAAG TGCTGTGCAA GCCGGGCAGC
GTCAAGCCGC ACACCCACTT CACGGGCGAG ATCTACGTGC TGAGCAAGGA AGAAGGCGGC
CGCCACACGC CGTTCTTCAA CAACTACCGC CCGCAGTTCT ACTTCCGCAC CACCGACGTC
ACCGGCGCCA TCGAGCTGCC CAAGGACAAG GAAATGGTCA TGCCCGGTGA CAACGTGTCG
ATCACGGTCA AGCTGATCGC CCCGATCGCC ATGGAAGAAG GCCTGCGTTT CGCCATCCGC
GAAGGCGGCC GTACCGTCGG CGCCGGCGTC GTGGCCAAGA TCATCGCGTA A
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| Protein sequence | MAKEKFERTK PHVNVGTIGH VDHGKTTLTA AITTVLAAKF GGSAKAYDQI DAAPEEKARG
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDAELLELV EMEVRELLDK YEFPGDDTPI VHGSAKLALE
GDKGPLGEQA IMKLADALDS YIPTPERAVD GAFLMPVEDV FSISGRGTVV TGRIERGIIK
VGEAIEIVGI SATQNTTCTG VEMFRKLLDQ GQAGDNVGIL LRGTKREDVQ RGQVLCKPGS
VKPHTHFTGE IYVLSKEEGG RHTPFFNNYR PQFYFRTTDV TGAIELPKDK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIA
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