Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3863 |
Symbol | |
ID | 6161176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4329913 |
End bp | 4332015 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641666636 |
Product | elongation factor G |
Protein accession | YP_001792882 |
Protein GI | 171060533 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC AGACCCCCAT CGAGCGGTAC CGGAACATCG GTATCTCGGC TCACATCGAC GCCGGCAAAA CCACCACCAC CGAGCGCATC CTGTATTACA CGGGTGTGAA CCACAAGATC GGTGAAGTCC ACGATGGCGC CGCCACGATG GACTGGATGG AGCAGGAGCA AGAGCGCGGC ATCACCATCA CGTCGGCCGC GACGACCTGC TTCTGGAAGG GCATGGACCG CTCGCTGCCG GAACACCGTT TCAACATCAT CGACACCCCC GGGCACGTCG ACTTCACGAT CGAAGTCGAG CGTTCGATGC GCGTGCTCGA CGGTGCCTGC ATGGTCTATT GCGCCGTCGG CGGCGTGCAG CCGCAGTCGG AAACCGTCTG GCGCCAGGCC AACAAGTACA AGGTGCCCCG CCTCGCGTTC GTCAACAAGA TGGACCGCAC CGGCGCGAAC TTCTTCAAGG TCGTCGACCA GATGAAGACC CGCCTGCGCG CCAATCCGGT GCCGGTGGTG GTGCCGATCG GCGCCGAAGA CAGCTTCACC GGCGTGGTCG ACCTGCTGAA GATGAAGGCC ATCATCTGGG ACGAAGCTTC CCAGGGCATG AAGTTCAGCT ACGAAGACAT CCCGGCCGGC CTCGAAGGCG TGGCCCAGGA ATGGCGCGAG AAGATGGTCG AGGCCGCGGC CGAAGCCAGC GAAGAGCTGA TGAACAAGTA CCTCGAGACG GGCGACCTGA CCGAGGACGA GATCAAGCTC GCGCTGCGCA CCCGCACCAT CGCCTGCGAG ATCCAGCCGA TGCTGTGCGG CACCGCGTTC AAGAACAAGG GCGTGCAGCG CATGCTCGAC GCCGTGATCG ACTACCTGCC GTCGCCGGTG GACATCCCCC CGGTCACCGG CACCGACGAC GACGATCAGC CGATCAGCCG CCGCGCCGAC GACAAGGAGA AGTTCTCCGC CCTGGCGTTC AAGCTGATGA CCGACCCGTT CGTTGGCCAG CTGACCTTCG TGCGCGTCTA TTCGGGCGTG CTGCAGTCGG GTTCGAGCGT CTACAACCCG ATCCGCGGCA AGAAGGAGCG CATCGGCCGG ATCCTGCAGA TGCACGCCAA CCAGCGTGAA GAAATCAAGG AGATCCTGGC CGGCGACATC GCCGCCTGCG TGGGCCTGAA GGAAGTCACC ACGGGCGAGA CCCTGTGCGA CATCGACTCG CCGATCACGC TGGTGAAGAT GATCTTCCCG GAGCCGGTGA TCTCGCAGGC TGTCGAGCCC AAGACCAAGG CCGACCAGGA AAAGATGGGC ATCGCGCTGG GCCGTCTGGC TGCCGAAGAT CCGTCGTTCC GCGTGCGCAC CGACGAAGAA TCGGGCCAGA CCATCATTTC CGGCATGGGC GAGCTGCACC TGGAAATCAT CGTCGACCGC ATGAAGCGCG AGTTCGGCGT GGAAGCCAAC GTCGGCAAGC CGCAGGTGGC GTATCGCGAA ACGATCCGTG ACCTGGTCAA GGACGTCGAA GGCAAGTTCG TGCGCCAGTC GGGCGGCAAG GGCCAGTACG GTCACGTCGT GCTGACCGTC GAGCCGCAGG AGCCGGGCGC CGGCTTCCAG TTCGTCGACG CCATCAAGGG CGGCGTCGTG CCCCGCGAGT TCATCCCCGC GGTGGAAAAG GGCCTGATCG ACACGCTGCC CAACGGCGTG CTGGCCGGTT TCCCGGTGGT CGACGTCAAG GTCACGCTGA CCTTCGGTTC GTACCATGAA GTCGACTCGA ACGAAAACGC CTTCAAGATG GCGGCGTCGA TGGGCTTCAA GGACGGCATG CGCAAGGCCA AGCCGGTGAT CCTCGAGCCG ATGATGGCCG TGGAAGTCGA GACCCCGGAA GACTACGCCG GCACGGTGAT GGGCGACCTG TCCAGCCGCC GCGGCATGGT CCAGGGCATG GACGACATGG TCGGTGGCGG CAAGGTCATC AAGGCCGAAG TCCCGCTGTC GGAAATGTTC GGCTACTCGA CCTCGCTGCG CTCGGCCACG CAAGGCCGCG CCACGTACAC GATGGAGTTC AAGCACTACA GCGAAGCTCC GAAGAACGTG GCCGACGCGA TCATCACCGC TCGCGGCAAG TAA
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Protein sequence | MARQTPIERY RNIGISAHID AGKTTTTERI LYYTGVNHKI GEVHDGAATM DWMEQEQERG ITITSAATTC FWKGMDRSLP EHRFNIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ PQSETVWRQA NKYKVPRLAF VNKMDRTGAN FFKVVDQMKT RLRANPVPVV VPIGAEDSFT GVVDLLKMKA IIWDEASQGM KFSYEDIPAG LEGVAQEWRE KMVEAAAEAS EELMNKYLET GDLTEDEIKL ALRTRTIACE IQPMLCGTAF KNKGVQRMLD AVIDYLPSPV DIPPVTGTDD DDQPISRRAD DKEKFSALAF KLMTDPFVGQ LTFVRVYSGV LQSGSSVYNP IRGKKERIGR ILQMHANQRE EIKEILAGDI AACVGLKEVT TGETLCDIDS PITLVKMIFP EPVISQAVEP KTKADQEKMG IALGRLAAED PSFRVRTDEE SGQTIISGMG ELHLEIIVDR MKREFGVEAN VGKPQVAYRE TIRDLVKDVE GKFVRQSGGK GQYGHVVLTV EPQEPGAGFQ FVDAIKGGVV PREFIPAVEK GLIDTLPNGV LAGFPVVDVK VTLTFGSYHE VDSNENAFKM AASMGFKDGM RKAKPVILEP MMAVEVETPE DYAGTVMGDL SSRRGMVQGM DDMVGGGKVI KAEVPLSEMF GYSTSLRSAT QGRATYTMEF KHYSEAPKNV ADAIITARGK
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