Gene Lcho_3862 details

Gene Information

• Locus tag: Lcho_3862
• ID: 6161175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4329358
• End bp: 4329828
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641666635
• Product: 30S ribosomal protein S7
• Protein accession: YP_001792881
• Protein GI: 171060532
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 49
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCACGTC GTCGCGAAGT CCCCAAACGG GAGATCCTGC CTGATCCGAA ATTCGGTTCG 
GTCGATCTGT CCAAGTTCAT GAACGTCATC ATGGAATCGG GCAAGAAGGC TGTTGCCGAG 
CGCATCATCT ACGGCGCCCT CGAGCAGGTC GAGAAGAAGG CCGGCAAGGA TCCGATGGAA 
ATCTTCCTGA CCGCGCTGAA CAACGTCAAG CCGATGGTCG AAGTGAAGTC ACGCCGCGTC 
GGTGGTGCGA ACTACCAAGT TCCCGTGGAA GTTCGCCCCA TCCGCCGGAT GGCTCTGGCC 
ATGCGCTGGC TGAAGGAATC GGCCCGCAAG CGCAGCGAGA AGTCCATGGC CCAGCGCCTG 
GCCAACGAGC TGATGGAAGC CTGCGAAGGC CGTGGCGGCG CGATGAAGAA GCGCGACGAA 
GTGCACCGCA TGGCTGAAGC CAACAAGGCG TTCTCGCACT TCCGTTTCTG A 

 

Protein sequence

MPRRREVPKR EILPDPKFGS VDLSKFMNVI MESGKKAVAE RIIYGALEQV EKKAGKDPME 
IFLTALNNVK PMVEVKSRRV GGANYQVPVE VRPIRRMALA MRWLKESARK RSEKSMAQRL 
ANELMEACEG RGGAMKKRDE VHRMAEANKA FSHFRF