| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3854 |
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| Symbol | |
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| ID | 6161207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4321916 |
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| End bp | 4323103 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666627 |
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| Product | beta-ketothiolase |
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| Protein accession | YP_001792873 |
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| Protein GI | 171060524 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC GTGACGTTGT CGTTCTGGGC GCAGCGCGTT CGGCCATTGG CACTTTCGGC
GGCAGCCTCG CCGACACCGA GCCCGCCGAG CTGGCCGGCA TGGTCATGAA AGAGGCGGTG
CTGCGCTCGG GCGTCGACCC GCAGGCCATC AACTACGTGA CGGTGGGCAA CTGCATCCCC
ACCGACAGCC GCTTCGCCTA CGTCGCCCGC GTGGCCTCGA TCCAGGCCGG CCTGTCGAAG
GATTCGGTGG CGATGGCCGT CAACCGCCTG TGCTCGTCGG GCCTGCAGGG CATCGTGACG
ACCTCGCAGA ACATCCTGCT GGGCGACTGC GACTACGGCG TGGGCGGCGG TGTCGAGGTG
ATGAGCCGCG GCGCCTACCT GTCGACCGCG ATGCGCAGCG GCGCGCGCAT GGGCGACACC
AAGATGATCG ACTCGATGGT CGCCACCCTG ACCGACCCGT TCGGCGTCGG CCACATGGGC
GTGACGGCCG AGAACCTGGT CACCAAGTGG GGCATCACCC GCGAGGAGCA GGACGCGCTG
GCGGTCGAGT CGCATCGCCG TGCCGCGCTG GCGATCGCCG AAGGCCGCTT CAAGAGCCAG
ATCGTGCCGA TCGTCAAGCA GACCCGCAAG GGCGAGGTCA CGTTCGACAC CGACGAGCAC
GTGAAGGCCA ACACCACGAT GGAAACGCTG GCCAAGATGA AGCCGGCGTT CAAGAAGGAA
GGCGGCACCG TGACCGCCGG CAACGCCTCG GGCATCAACG ACGGCGCCGC CTTCTTCGTG
CTGGCCGACG CCGCCCGTGC CGCTGCCGAC GGCCACAAGG CGATCGCCCG CCTGGTGTCC
TACGCCGTGG CCGGCGTGCC CAACGAGGTG ATGGGCGAAG GCCCGATCCC GGCCACCAAG
CTGGCGCTCA AGAAGGCCGG CCTGCGGCTC GACCAGATCG ACGTCATCGA GTCGAACGAA
GCCTTCGCGG CCCAGGCCAT CGCGGTCGCG CGTGGCCTGG AATTCGACAT GAGCAAGGTG
AACCCGAACG GCGGCGCGAT CGCGCTGGGC CACCCGGTCG GCTGCTCGGG CGCCTTCCTG
GCGACCAAGG CGATCTACGA ACTGCAGCGC ACCGGTGGCC GCTACGCGCT GGTGACGATG
TGCATCGGCG GCGGCCAGGG CATCGCGACG ATCTTCGAGC GCATCTGA
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| Protein sequence | MSTRDVVVLG AARSAIGTFG GSLADTEPAE LAGMVMKEAV LRSGVDPQAI NYVTVGNCIP
TDSRFAYVAR VASIQAGLSK DSVAMAVNRL CSSGLQGIVT TSQNILLGDC DYGVGGGVEV
MSRGAYLSTA MRSGARMGDT KMIDSMVATL TDPFGVGHMG VTAENLVTKW GITREEQDAL
AVESHRRAAL AIAEGRFKSQ IVPIVKQTRK GEVTFDTDEH VKANTTMETL AKMKPAFKKE
GGTVTAGNAS GINDGAAFFV LADAARAAAD GHKAIARLVS YAVAGVPNEV MGEGPIPATK
LALKKAGLRL DQIDVIESNE AFAAQAIAVA RGLEFDMSKV NPNGGAIALG HPVGCSGAFL
ATKAIYELQR TGGRYALVTM CIGGGQGIAT IFERI
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