| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3829 |
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| Symbol | |
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| ID | 6161893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4291513 |
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| End bp | 4292148 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666602 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001792848 |
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| Protein GI | 171060499 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.707437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAT CGAATACCTC GCGCCACCCC CGCCGTCGCA CCGCGCTGCT CGCCGGCCTG
TCCCTGTTGA GCGGCCTGGG CGCGCTCGCA GGCTGCGACG CCCCGGTGCC CACCGCCGCG
TTCAAGGCGG TCGACATCAG CGGCGCCGAT TACGCCGACC AGCTCGAACT GCCCGACGTC
GACGGCAAGC GCCGCAACCT GAGCGAGTTC AAGGACAAGC TGGCGGTGGT CTTCTTCGGC
TACACGCAGT GCCCGGACGT CTGCCCGACC ACCCTCAACG ACCTGGTCGA GACCCAGCGC
CTGCTCGGCC CCGACGGCGA CAAGCTGGTG GCGATCCTGG TCACGGTCGA CCCCGAACGC
GACACCGCCG CGCTGCTGAA GGGCTACGTC GGCAACTTCA ATCCGTCATG GGTGGCGTTG
CGCGGCAGCG CCGAAGAAAC CGCCGCCGCG GCCAAGCGCT TCAAGGTCTT CTACCGCAAG
GCGCCCGGCA CGAGCGCGGA CACCTACACG GTCGACCACA CCGCCGCGTC CTACGTGTTC
GACACCCAGG GGCGCATCCG CCTGTACGTG CGCAACGGCA CGCCGCCGGC CGACCTGGCG
GCCGACCTCA AGATCCTGCT GGCCCAGAAG GGCTGA
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| Protein sequence | MSSSNTSRHP RRRTALLAGL SLLSGLGALA GCDAPVPTAA FKAVDISGAD YADQLELPDV
DGKRRNLSEF KDKLAVVFFG YTQCPDVCPT TLNDLVETQR LLGPDGDKLV AILVTVDPER
DTAALLKGYV GNFNPSWVAL RGSAEETAAA AKRFKVFYRK APGTSADTYT VDHTAASYVF
DTQGRIRLYV RNGTPPADLA ADLKILLAQK G
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