| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3817 |
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| Symbol | |
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| ID | 6160624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4281447 |
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| End bp | 4282379 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666590 |
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| Product | biotin synthesis protein BioC |
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| Protein accession | YP_001792836 |
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| Protein GI | 171060487 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4106] Trans-aconitate methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.335829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC CCCCCGCCCC CGCCCTCGAA GCACCCGCCG GGCCGGCCGG CCGAGGCACC
CACATCGACC CCGCCGCGCT GGCCCGACTG CGCCGCCAGC TCGATCAGGC CGAGCAGCCC
GCACCCTGGC TGCACGGCGA GATCGCCCGG CGCATGGCCG AGCGGCTGCC GCTGATCCGC
CTGCAGCCGC AGAGCGTGCT CGACTGGGGG GCGCAGGCCG GCAGCAGCCA GGCGCTGCTG
GCTCGGCAGT ACCCGAAGGC GCGCCGGATG GCGGTCGACA GCCTCGGCCA GCCGCCGGCC
GACACCGCGA AGTCCGGCTC GTGGTGGCGC CGCCTGACCG GCGAGCGCGC CGCGCCGGCC
ACGTCCGGTC CGCCACCGGC CGACCTGCTG TGGTCGAACA TGACGCTGCA CTGGGTCGAC
GACCTGGCCG GGCTGTTCGC CCGCTGGCAG GCCGCCACGG CGATCGACGG CTTCCTGATG
TTTTCGTGCC TCGGGCCCGA CACGCTGCGC GAGCTGCAGG CGACCTACCG CAGCGCCGGT
TTCGGCTCGC CGGGCAGCCG GCTGGTCGAC ATGCACGACA TCGGCGACGC CCTGGTGCAC
GCCGGCTTTG CCGATCCGGT GATGGACATG GAGCAGCTCA CGCTGACCTG GGACAGCGCG
CAGGCGATGC TCGACGAGCT GCGCTCGCTG GGCCGCAACA CCGATCCGCA GCGCCACGCC
GGACTGCGCA CGCCGCGCTG GCACGTCGCC CTGCTCGAAC GGCTCGACGC CGGACTGCGC
CGCCCCGACG GCCGCCTGCA CCTGACGTTC GAGGTGATCT ACGGCCACGC CTTCCGACCA
CCGGCCAAGG CCCGGGTGGC GGCCCAAACG GAAATATCGC TCGGCGACAT GCGTGAAATG
ACGCGCCGGC GCAACCCCCA GGGCCCGCGC TGA
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| Protein sequence | MEQPPAPALE APAGPAGRGT HIDPAALARL RRQLDQAEQP APWLHGEIAR RMAERLPLIR
LQPQSVLDWG AQAGSSQALL ARQYPKARRM AVDSLGQPPA DTAKSGSWWR RLTGERAAPA
TSGPPPADLL WSNMTLHWVD DLAGLFARWQ AATAIDGFLM FSCLGPDTLR ELQATYRSAG
FGSPGSRLVD MHDIGDALVH AGFADPVMDM EQLTLTWDSA QAMLDELRSL GRNTDPQRHA
GLRTPRWHVA LLERLDAGLR RPDGRLHLTF EVIYGHAFRP PAKARVAAQT EISLGDMREM
TRRRNPQGPR
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