| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3816 |
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| Symbol | |
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| ID | 6160623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4280618 |
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| End bp | 4281418 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641666589 |
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| Product | putative phosphoribosyl transferase |
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| Protein accession | YP_001792835 |
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| Protein GI | 171060486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.231863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGC CGACGAGCGT CCACGAGCCG GCCGACCTGC CGCCGTCCCC TGCGGATCAC
GACACCGTGC TGCGCGCCGC TGGCCGCACG CTGGCCGACG CCTGGCGCTG CGGCCCGGCT
TTCGGCAGCC TGTGCCGGGT GTGCCGGCGC TGGCAGCGTT CGGCCTTGTG CGAGCCCTGC
CTGCGGCTGC ACGCCGCGCC GGTGCCACGG TGCGGCCGCT GCGCCATCGA GGTCGCGACG
GGTGTCGCGC AGTGCGCCGA CTGCATGCGC CGGCCGCCGC CGATGTCCGC CACCTTCGCC
GCGGTCGACT ACGGCTACCC GTGGGACGCG CTGATCGCGC GCTTCAAGTT CAACGAGGCG
GTCGAGCTGG CGCGGCCGCT GACAGGCCTG ATGACACGCG GCCTGGCGGC GGCATTCGAC
GCCGGCCTGC CGCGCCCCGA CCTGATCGTG CCGGCGCCGC TCACCCCCGA GCGCCTGCGC
GAGCGCGGCT ACAACCAGGC CTGGGAGCTG GCGCGGCGGC TCGGCCGGGC CTTCGATCTG
GCGGCACGCC ACGACCTCGT CGAACGGGTC ATCGGCGGCG CCCATCAGGC CGCGCTGCAC
GGCGACGAGC GCCGTCGCCA GGTGCGCGGC GCCTACGCGC TCACGGCTGC CGGCCAGATC
GCGGTGGCGG CGCGCCACGT CGCGATCGTC GACGACGTCA TGACCACCGG CGCTACCCTC
GCCGAGCTGG CGCTCACCTT GCAGCGCGGC GGCGCGGCCA GCGTGCAGGC CTGGGTGCTG
GCGCGCACGC CGGCCCGCTG A
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| Protein sequence | MPLPTSVHEP ADLPPSPADH DTVLRAAGRT LADAWRCGPA FGSLCRVCRR WQRSALCEPC
LRLHAAPVPR CGRCAIEVAT GVAQCADCMR RPPPMSATFA AVDYGYPWDA LIARFKFNEA
VELARPLTGL MTRGLAAAFD AGLPRPDLIV PAPLTPERLR ERGYNQAWEL ARRLGRAFDL
AARHDLVERV IGGAHQAALH GDERRRQVRG AYALTAAGQI AVAARHVAIV DDVMTTGATL
AELALTLQRG GAASVQAWVL ARTPAR
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