Gene Lcho_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3812 
Symbol 
ID6160619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4277729 
End bp4278403 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content73% 
IMG OID641666585 
Productphosphoglycerate mutase 
Protein accessionYP_001792831 
Protein GI171060482 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.234713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC TGACTCTTGT GCGCCACGGT GAAACCGACT GGAATCGCAT CCGCCGCTTC 
CAGGGTCAGC TCGACGTTCC GCTCAACGAA CTGGGTCATC TGCAGGCCGG GCGATTGCCG 
CAGGCGCTGG CCGGCGACCA CTTCGACCTC GTGCTCGCCA GCGACCTGGC CCGCGTGCGC 
GCCACCGCCG CGCCGCTGCT GGCGCAGCGC GGCTGGACCG CGCATCACGA CGCCCGCTGG 
CGCGAGCAGC ATTACGGCGC CTTCGAGGGC CAGGACGTCG CCACGCTGCG CCGCGAGCAG 
CCCGAACTCT GGCGCCGGTA CGGCGAACAC CGGGCCGACT TCGCGCCGCC CGGCGGCGAG 
ACCACCCGCC AGTTCTACGC GCGCGTGCAC GCCGCGGTGC AGGATGTGGT CGAACGCCAC 
GCCGGCCGCC GCGTGCTGAT CGTCACCCAC GGGGGCGTGC TCGACATGCT GTGGCGCGGC 
GTGCACGGCC TGCCGCTCGA CGGCGCGCGC CGCTGCGCCA TCCCGAACGC CGGCATCAAC 
CGCCTGCGCT GGCAGGACGG CCGTCTGACG ATCGTGAGCT GGGCCGTGGC CGATCACCTG 
GCCGACCTGC CCGAGCAGCC GTCGACCGAC CCGCTGACGT CGGCCCCGGC CGATCCCGAC 
GCGATCGCCC CCTGA
 
Protein sequence
MTELTLVRHG ETDWNRIRRF QGQLDVPLNE LGHLQAGRLP QALAGDHFDL VLASDLARVR 
ATAAPLLAQR GWTAHHDARW REQHYGAFEG QDVATLRREQ PELWRRYGEH RADFAPPGGE 
TTRQFYARVH AAVQDVVERH AGRRVLIVTH GGVLDMLWRG VHGLPLDGAR RCAIPNAGIN 
RLRWQDGRLT IVSWAVADHL ADLPEQPSTD PLTSAPADPD AIAP