| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3810 |
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| Symbol | |
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| ID | 6160489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4276165 |
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| End bp | 4277103 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666583 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001792829 |
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| Protein GI | 171060480 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.251082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACTTCC AGCAACTGCG CGCCGTGCGC GAAACGGCCC GCTCGGGCTT CAACCTGACC
GACGTGGCCG CCGCGCTGCA CACCTCGCAG CCCGGCGTCA GCCGCCAGAT CCGCGAGCTC
GAGGACGAGC TCGGCGTCGA GATCTTCGTG CGCGCCGGCA AGCGCCTGAC CGGCCTGACA
CCGCCCGGCG AGGCGGTGCT GCCGATCGTC GAGCGCCTGC TGCTCGACGC CGACAACCTG
CGGCGCGCCG GTGCCGACTT CGCGTCCCAG GACACCGGCC GGCTGTCGAT CGCCGCCACC
CACTCGCAGG CGCGTTACGC GCTGCCGCAG GTGGTGCGCG ATTTCCGCAC GCTCTATCCG
CACGTCACGC TCAACCTGCA CCAGGGCTCG CCGCGCCAGG TGGCCGAGAT GCTGCTGTCG
GGCGAGGCCG ACATCGGCGT CGCCACCGAG GCGCTGGCGC AGTACGAGCA GCTGGTGGCG
CTGCCGTGTT ACCGCTGGAC CCACAGCGTC GTGGTGCCGG TCGGGCATCC GCTGCTCGAT
GTGGACGGGC CGATCACGCT GGCGCAGCTC GCGCGCGAAC CCATCGTCAC CTACGACACC
GGCTACACCG GCCGCACCCA CATCGACGAG GCCTTCGCCC GCGCCGGCCT CAAGCCCGCC
GTGGTGCTGA CCGCAATGGA CGCCGACGTC ATCAAGACCT ACGTCGAGCT CGGCATCGGC
GTGGGCCTCG TCGCCTCGAT CGCCTTCGAC GCCGAGCGCG ACCGCAACCT GCAAGCGCTC
GACGCCGGCC ACCTGTTCGA GATCAACCTG ACCCGGCTGG CGATCCGGCG CGGCACCTGG
CTGCGCGGCT ACGTCTACGC CTTCATCGAG GCCTTTGCAC CGACGCTGAC ACGCGAGGCG
GTCGAGCAGG CGCTGACGGG CGAGCCGGTC GAAGACTGA
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| Protein sequence | MNFQQLRAVR ETARSGFNLT DVAAALHTSQ PGVSRQIREL EDELGVEIFV RAGKRLTGLT
PPGEAVLPIV ERLLLDADNL RRAGADFASQ DTGRLSIAAT HSQARYALPQ VVRDFRTLYP
HVTLNLHQGS PRQVAEMLLS GEADIGVATE ALAQYEQLVA LPCYRWTHSV VVPVGHPLLD
VDGPITLAQL AREPIVTYDT GYTGRTHIDE AFARAGLKPA VVLTAMDADV IKTYVELGIG
VGLVASIAFD AERDRNLQAL DAGHLFEINL TRLAIRRGTW LRGYVYAFIE AFAPTLTREA
VEQALTGEPV ED
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