Gene Lcho_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3748 
Symbol 
ID6161217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4206315 
End bp4206671 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content66% 
IMG OID641666521 
ProductArsR family transcriptional regulator 
Protein accessionYP_001792767 
Protein GI171060418 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGA ATACCGAGGC CGATACCGTC TTTGATTCGG TGGCCGAGCT GTTTTCCCTG 
CTGTCGACGC CGATCCGGCT GAAGATCATC AGCGCGCTGT GCCACGGCGA AAAGAACGTG
TCGCAGCTGC TCGACGAGAT CGACACCACG CAGCCCAACA TGTCGCAGCA CCTGTCGACG
CTCTACCGCG CCGGCGTGCT CGGCAAGCGG CGCGACAGCA CCCAGATCTA CTACCGCCTG
CAGAGCGAGC GCGTCGCCAC GCTGTGCCGC GCGGTCTGCA CGCAGGTGGC GATCGAACTC
GACGAGCAGG CCGAGCTGTC GGTGGCCGAC CGCCTGCTGC CGAAGGCGGC GCGCTGA
 
Protein sequence
MDTNTEADTV FDSVAELFSL LSTPIRLKII SALCHGEKNV SQLLDEIDTT QPNMSQHLST 
LYRAGVLGKR RDSTQIYYRL QSERVATLCR AVCTQVAIEL DEQAELSVAD RLLPKAAR