Gene Lcho_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3716 
Symbol 
ID6161727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4158493 
End bp4158804 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content71% 
IMG OID641666489 
Producthypothetical protein 
Protein accessionYP_001792735 
Protein GI171060386 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.270803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAC GCATCGCCGT CTTGTGGACC GTGGTCAGGC ACGATGTGCG GCTGCTCTGG 
TTTGCCCTGC AGCACCCGCA GGCGCCGGGC TGGCTGAAGT GGGCGGCAAT CGGGCTGGTG
GCCTACGTGC TGTCGCCGGT CGACTTCATC CCCGACATGC TGCCGATCGT CGGCTGGCTC
GACGATGCGG TGCTGGTGCC GCTGGTGATG CGCTGGCTGA TCGGCCGCCT GCCGGCGCAT
GTGCGTGCCG CCGCCGAACG CCGCTCGCGC GGCGAGCGCC CGGCCGAGGC CGAGGTCATC
GACGTGCGCT GA
 
Protein sequence
MWKRIAVLWT VVRHDVRLLW FALQHPQAPG WLKWAAIGLV AYVLSPVDFI PDMLPIVGWL 
DDAVLVPLVM RWLIGRLPAH VRAAAERRSR GERPAEAEVI DVR